Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2539 |
Symbol | |
ID | 8420415 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013224 |
Strand | - |
Start bp | 30965 |
End bp | 32182 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 645039136 |
Product | protein of unknown function DUF262 |
Protein accession | YP_003199393 |
Protein GI | 258406652 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000000000000210562 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 124 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGAAA CAAATGTGCC AATAATTTCA AACCAGACAA CTGCTCAAAA TGAGGCTGTT GAAACAATCT TGCGTCGATT TGAGGAAGAA GAGCTTTTTG TACCTCGATA CCAAAGAGAC TCTGACGAAT GGGATGAAAG CAGAAAGAGC TTATTTATTG AGTCTGTGCT TAACAGGTTG ACAGTTCCGG CTTTTTACTT GGCTCCCAGT GAAGATGACC CCGAGAGGCT GGAAATAGTG GATGGTCAGC AAAGAATAAT GGCTTTATAT AACTTTTTTA AGCATGCGTT TGAATTATGC AATGACGATC TATGCCCCTA TTTTGGGCCA AGCGTTGAGT ATGCAGGACG AAAATATGAA AATATGGATG ACGCTTGGAA AAGAGTTTTT AGAAGATACA ATTTAACAGT AGTTACTCTT CCACAGGGGA TGCCACTAGA ACTAAGGTTA GAAATATTCA GGCGAATAAA TGAAGGTGGC ACTCCACTTA GCCCTCAAGA TATACGACTT GGCTACTACA GTGATTCTGA AGAAGTAAAT TTCTGTCAAT TAGCTGGCAT ATTTGATATA GAAAAAAATG GTAGCCAGAG AAAGCTTAAT AGCTGTGAAA AATTATCGTG GCCTTGGGCT GATTACGATA AAGAAGCAGA AGAATGGAAA AAGTGGTGGG AAAACACGAA AACATCCACC GGCCAGACGG CTTCCGAAAT GTTTTTGTGG TTTATTGTGA GTTCATGCAA AAACAGTATA AAAAGCATAA TAAACAACAA GAACCATTTA ACTAAATCTC TAAATCTGAA TTTTAGAAAT AGCACAGCAG AAGTTTTAGA TATTATATGT GCGCAATGGA GGTTTCAATC TAAAAATAAA AACGTAACAA ATATTCTTCC TAAAAGTGAT ACATTAAAGG AGTCGTACTT TCCAGTTTTC GTTAAATGGT GGTATCGTTT TAGATGCATG TGTCCTGGAC AAGCAAACAT TAACAGGTAT AGGACCATCG CAATGTTTAT ACCTGCACTT GAAAATGCTT TTGGAGAAAG TGAAATAACT GAAGTCCAAT GGAGTTGGAT TTGCAACTTT ATTGGCAGCT CACGATCGAC TGCTAAGAAT TTAGGTGTTG ATTTTCCTGA ATCAAAAGGA AGGTGGTTAG GAAATCGAGG GCAAGAAGTG CAGTTAGATA GCTATTACAA AATAGCAAAA GCAATAAAGG CTAAATAA
|
Protein sequence | MSETNVPIIS NQTTAQNEAV ETILRRFEEE ELFVPRYQRD SDEWDESRKS LFIESVLNRL TVPAFYLAPS EDDPERLEIV DGQQRIMALY NFFKHAFELC NDDLCPYFGP SVEYAGRKYE NMDDAWKRVF RRYNLTVVTL PQGMPLELRL EIFRRINEGG TPLSPQDIRL GYYSDSEEVN FCQLAGIFDI EKNGSQRKLN SCEKLSWPWA DYDKEAEEWK KWWENTKTST GQTASEMFLW FIVSSCKNSI KSIINNKNHL TKSLNLNFRN STAEVLDIIC AQWRFQSKNK NVTNILPKSD TLKESYFPVF VKWWYRFRCM CPGQANINRY RTIAMFIPAL ENAFGESEIT EVQWSWICNF IGSSRSTAKN LGVDFPESKG RWLGNRGQEV QLDSYYKIAK AIKAK
|
| |