Gene Dret_2539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2539 
Symbol 
ID8420415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013224 
Strand
Start bp30965 
End bp32182 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content38% 
IMG OID645039136 
Productprotein of unknown function DUF262 
Protein accessionYP_003199393 
Protein GI258406652 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000000000210562 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones124 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAAA CAAATGTGCC AATAATTTCA AACCAGACAA CTGCTCAAAA TGAGGCTGTT 
GAAACAATCT TGCGTCGATT TGAGGAAGAA GAGCTTTTTG TACCTCGATA CCAAAGAGAC
TCTGACGAAT GGGATGAAAG CAGAAAGAGC TTATTTATTG AGTCTGTGCT TAACAGGTTG
ACAGTTCCGG CTTTTTACTT GGCTCCCAGT GAAGATGACC CCGAGAGGCT GGAAATAGTG
GATGGTCAGC AAAGAATAAT GGCTTTATAT AACTTTTTTA AGCATGCGTT TGAATTATGC
AATGACGATC TATGCCCCTA TTTTGGGCCA AGCGTTGAGT ATGCAGGACG AAAATATGAA
AATATGGATG ACGCTTGGAA AAGAGTTTTT AGAAGATACA ATTTAACAGT AGTTACTCTT
CCACAGGGGA TGCCACTAGA ACTAAGGTTA GAAATATTCA GGCGAATAAA TGAAGGTGGC
ACTCCACTTA GCCCTCAAGA TATACGACTT GGCTACTACA GTGATTCTGA AGAAGTAAAT
TTCTGTCAAT TAGCTGGCAT ATTTGATATA GAAAAAAATG GTAGCCAGAG AAAGCTTAAT
AGCTGTGAAA AATTATCGTG GCCTTGGGCT GATTACGATA AAGAAGCAGA AGAATGGAAA
AAGTGGTGGG AAAACACGAA AACATCCACC GGCCAGACGG CTTCCGAAAT GTTTTTGTGG
TTTATTGTGA GTTCATGCAA AAACAGTATA AAAAGCATAA TAAACAACAA GAACCATTTA
ACTAAATCTC TAAATCTGAA TTTTAGAAAT AGCACAGCAG AAGTTTTAGA TATTATATGT
GCGCAATGGA GGTTTCAATC TAAAAATAAA AACGTAACAA ATATTCTTCC TAAAAGTGAT
ACATTAAAGG AGTCGTACTT TCCAGTTTTC GTTAAATGGT GGTATCGTTT TAGATGCATG
TGTCCTGGAC AAGCAAACAT TAACAGGTAT AGGACCATCG CAATGTTTAT ACCTGCACTT
GAAAATGCTT TTGGAGAAAG TGAAATAACT GAAGTCCAAT GGAGTTGGAT TTGCAACTTT
ATTGGCAGCT CACGATCGAC TGCTAAGAAT TTAGGTGTTG ATTTTCCTGA ATCAAAAGGA
AGGTGGTTAG GAAATCGAGG GCAAGAAGTG CAGTTAGATA GCTATTACAA AATAGCAAAA
GCAATAAAGG CTAAATAA
 
Protein sequence
MSETNVPIIS NQTTAQNEAV ETILRRFEEE ELFVPRYQRD SDEWDESRKS LFIESVLNRL 
TVPAFYLAPS EDDPERLEIV DGQQRIMALY NFFKHAFELC NDDLCPYFGP SVEYAGRKYE
NMDDAWKRVF RRYNLTVVTL PQGMPLELRL EIFRRINEGG TPLSPQDIRL GYYSDSEEVN
FCQLAGIFDI EKNGSQRKLN SCEKLSWPWA DYDKEAEEWK KWWENTKTST GQTASEMFLW
FIVSSCKNSI KSIINNKNHL TKSLNLNFRN STAEVLDIIC AQWRFQSKNK NVTNILPKSD
TLKESYFPVF VKWWYRFRCM CPGQANINRY RTIAMFIPAL ENAFGESEIT EVQWSWICNF
IGSSRSTAKN LGVDFPESKG RWLGNRGQEV QLDSYYKIAK AIKAK