| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2522 |
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| Symbol | |
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| ID | 8420383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013224 |
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| Strand | + |
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| Start bp | 15496 |
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| End bp | 16902 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 645039123 |
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| Product | transcriptional regulator, XRE family |
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| Protein accession | YP_003199380 |
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| Protein GI | 258406639 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 0.153243 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 119 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATTG CCGGCAACCA ACTTCGCGAA ACAAGACTAG AGCTAGGCCT TTCCCAAGCA
AGGCTGGCTG AGTTAACGGG TATTTCGCAG CACTTACTGT CTGCTTACGA GCTTGAGAAG
TCTACCCTGG CACCCGATCT CATTCAAAAG TTGGCTTCTA CCCTTCAGGA TAAAGAGCAG
ATCCGAAATA TTACTGGCCG TAAAAAGCGC TATAGAAACC ACGAATACAA GTTCACGCCA
AAACAGTCAG GCAGATCATC AAGGGCCAGC CGGACGAATG GAAATGAGTC GTTTATTAAC
GCGCTCTCCA TTATAGAAAA GAAACATGCT AATCCGAAAG GAGAAGCTTT AAATGCTATC
AGCCTATTTT CAGGATGTGG TGGATTTAGC CTTGGCTTTT CTGCTGCGGG ATTTAATGTG
CGCGGGTTTC TCGAATTAGA TCCAGGCCTA CGAAAAATAT ATCGTTTAAA TTTTCCAAAT
AGCTTTGAAA TGGGTGGCGA TATTACGCAA ATCCAAGACG CCAAAATTAA AAACTACAAG
TCATTGATTG GAGATATTGA CGTAATTATT GGCGGCCCAC CGTGCCAAGG ATTTAGCTTA
TCTGGTAAAC GGGATGTTAA TGACCCTAGA AATACACTTT TCAAGCATTA TTTACGGTTT
GTAGACGCAT TTAGGCCAAA AATTGCAATA ATGGAAAATG TTCGCCTCTT ATCCTCTATG
AAAAACTCCG AAGGAAATTT GGTTAAATGC GATATTGAAA GTGACTTCCA CAATCATGGC
TATAATGTAC AAAGCTTCGA AATAAACGCC AAAGATTATG GTGTCCCTCA GCATAGAGAG
AGAATTATAT TTGTCGCAGT ACGAAATGAC TTATCAATAA AATCTTCAAT TCCTGATCCA
AAATTTGGAT ACGTTGAAGA TTTACTTAGC AATAAAATCC CATACAGAAC ATTTGGTGAT
GCCTGCTCTG ATTTAGAGTT TTTAGAGTCA GGAGAAAAGG GTAGCGACGT ATTTCATGCG
GCAGTCAGAC ATCCTTCACA TGTAATTGAA TGGTTATGGG ATGTGCCGGA AGGAAAAAGC
GCCCATGATA ATGAAGACCC AAAACTTCGT CCACCCTCCG GCTACAATAC AACCTACAAG
CGCCAAATAT GGGATGAGCC AGCGTCTACG GTTCAAACCA CTTTTGGGAT GATATCTGGC
TGCCGTAATG TACACCCCAT TGCCACACGC TCTTTGACAA TTAGAGAGGC TGCACGTATT
CAGTCATTTC CAGACTCTTT TAAACTAGTT GGGAGATTGG GAATTATACG AACTGGAATT
GGTAATGCTG TGCCTCCACT TCTAGCATAC GAGCTTGGCG AACACTTTAA GGAATTCCTA
AATTTTGTAG AAGTACCCAG CCTCTAG
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| Protein sequence | MNIAGNQLRE TRLELGLSQA RLAELTGISQ HLLSAYELEK STLAPDLIQK LASTLQDKEQ
IRNITGRKKR YRNHEYKFTP KQSGRSSRAS RTNGNESFIN ALSIIEKKHA NPKGEALNAI
SLFSGCGGFS LGFSAAGFNV RGFLELDPGL RKIYRLNFPN SFEMGGDITQ IQDAKIKNYK
SLIGDIDVII GGPPCQGFSL SGKRDVNDPR NTLFKHYLRF VDAFRPKIAI MENVRLLSSM
KNSEGNLVKC DIESDFHNHG YNVQSFEINA KDYGVPQHRE RIIFVAVRND LSIKSSIPDP
KFGYVEDLLS NKIPYRTFGD ACSDLEFLES GEKGSDVFHA AVRHPSHVIE WLWDVPEGKS
AHDNEDPKLR PPSGYNTTYK RQIWDEPAST VQTTFGMISG CRNVHPIATR SLTIREAARI
QSFPDSFKLV GRLGIIRTGI GNAVPPLLAY ELGEHFKEFL NFVEVPSL
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