Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2507 |
Symbol | |
ID | 8420369 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013224 |
Strand | + |
Start bp | 3657 |
End bp | 5123 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 645039109 |
Product | hypothetical protein |
Protein accession | YP_003199366 |
Protein GI | 258406625 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 67 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 124 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAGA AAAAAAGACG CTCCCTCTAC GACACATTAT CCGCACGGGA TAGCGGACAG GACGATGAGC TTCGAGAGAC ATTTAAACGT GTACGTGAAA TCAATACAAA ACAGTCCACT GAAACCACCC CTCCATCTGA GAACTCCAAT AAAAAAGTCC AAGCCCAAGA CAAGAGCCCA TCTGGACCGC TCATTCATAC CGCCCAAACA AACCGCTCAA ACATACCGAT TACTCATTCA GATCAACAAA GTAATAATAA AGAAAATAAC AAATCAAAAC AAGAATTTAA CAAAGATAGC CTTGGTGACA CAAACCGCTC ACCTAAAGCG CCCACAAATA CCGCTCAAAA CAACCGCTCA AGCAAAGCGC TCGCTAATAC CGCTCAGGTA GACCGCCCAA ACAAACCGCT CGAAAACAAC CATACCGCTC ATTTAAACAG CTCAAATGAA CCGTTTACTC GAGCGCTTCG AGCGCAATCA TTGAGCGGTA CTAATGAGCG GTATGCCCAA GCGGTACAAA TGAGCGGTTC AGAGGAGTCA CATGAGCCCA CTGAAGACCC TCAAAATATC CTCCTAAAAC CCAAATCTTC CATCAGATCT AGAAACCAAA AAAAGATTTT TGACTACCTT CAGCGGATTG GCTCCCAAAC GACCACCCTT ACATATATAT CTAATATTAC TGGTGTTCCG TACAGCACAA CGAGACGAAT AATAAGCAAA TTTAAAGCTG AAGGGCTTAT TTATTACAGA ACGCTGTTCG TTAAGGACGT AGGCTGGTGC GCAAAAATCT GGATAATAAA TTCAGAAGGC GAGACACCCA ACCGAGCGGT ACAAATGAGC GGCATAAATG GGCGGTATGA ATGGGCTGTA TCAAACGCCT CTAAGATAGA TAGAGAATCT ATCTATCTAA AAGAGGGGGG TGTGGGGGGA GATGGGCAAG ATCAACCTGA CAACTCATCC TCTTCTAGTG AGGCTCGTCT CAACCAGCTC ACCGACGAAG ATATTGCTTT CTTTTGGCCA AAGCTTCACC AATCTGGTTT TGGAGCTCAC CAGGTCCAGC AAATCGTTCA AAGACTTTCC AAGGTGGATA AAAAAGCCGA CAAAGTTATC CAGGGGCTTG ATCACGCTGA ATGGGAACTA GATCAGGGAA AGATGACTGA CAAAGAAGGT AATCCCGTAG GGAATCCATG TTCTTACGTG TTCAGTTCTC TAGCCAGAGA AGGCTATTAT CGTCGTCCAT CTGGATATAT TTCCCCGGAA GAACAAGCTG AGCTGGATGC CAAGGAAGAA GCTGATAGGC TGCAACAACT GGGGAAAGAG AAAAAGGAAT CTCAGTTTAA AGCATGGAAG GCAAATTTGT CGGAAGAGGA GTTAAATCAA ATTTTGGCTT GTAAAACTCA CAAAGGACCA ACGGATCCGT GGCTTAGGCA ATATTGGGAA AAGACTATTT ATTATACAAC AAAGTAA
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Protein sequence | MAKKKRRSLY DTLSARDSGQ DDELRETFKR VREINTKQST ETTPPSENSN KKVQAQDKSP SGPLIHTAQT NRSNIPITHS DQQSNNKENN KSKQEFNKDS LGDTNRSPKA PTNTAQNNRS SKALANTAQV DRPNKPLENN HTAHLNSSNE PFTRALRAQS LSGTNERYAQ AVQMSGSEES HEPTEDPQNI LLKPKSSIRS RNQKKIFDYL QRIGSQTTTL TYISNITGVP YSTTRRIISK FKAEGLIYYR TLFVKDVGWC AKIWIINSEG ETPNRAVQMS GINGRYEWAV SNASKIDRES IYLKEGGVGG DGQDQPDNSS SSSEARLNQL TDEDIAFFWP KLHQSGFGAH QVQQIVQRLS KVDKKADKVI QGLDHAEWEL DQGKMTDKEG NPVGNPCSYV FSSLAREGYY RRPSGYISPE EQAELDAKEE ADRLQQLGKE KKESQFKAWK ANLSEEELNQ ILACKTHKGP TDPWLRQYWE KTIYYTTK
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