Gene Dret_2495 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2495 
Symbol 
ID8420357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2859770 
End bp2860534 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content59% 
IMG OID645039098 
ProductSilent information regulator protein Sir2 
Protein accessionYP_003199355 
Protein GI258406613 
COG category[K] Transcription 
COG ID[COG0846] NAD-dependent protein deacetylases, SIR2 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCTTC CCGACACCAA GACCCTGGCT GCAGCCGCAA CTGCCATCAG GGATTCCCGT 
TGTACGGTTG CCTTTACCGG GGCCGGGATT TCCGTGCCCA GCGGCATCCC GGATTTCAGG
AGTCCAGGAG GGTTGTGGTC ACGGTATGAT CCGGAACAGG TCTGCTCGGA ATGGGCCCTG
CGAAAAAATC CAGTCGGGGT CTGGGAATTT CTGCGCGACG CATTGGAACT CTTTGACACG
GCAACGCCGA ACCAGGCCCA TATCGCCCTG GCCGAACTGG AACAGCAGGG GCTTCTCTCC
GCGGTGATTA CCCAAAATAT CGACAATCTC CATCAAGAGG CCGGATCACA GGAGGTCATC
GAATATCACG GCAATTGCCG CCGGTACTAC TGCCATGGCT GTGCTGCTTC ATACCCCTCC
GATCAGATTG CCGCCCAGGT CAGAAGGAAA ATCCCTGTTT TGTGCGCCTC GTGTGAAGCG
GTCATCCGGC CCGACGTCGT CTTTTTCGGG GAAGCCATCC CCCAGGAGGC CTTGTTCCGC
AGCGCCGCGC TGGCCAGAGA GGCCGATGTG ATGATCGTTG TCGGGACCTC CGGAACAGTG
GCCCCGGCCA ATATCATCCC CCAGGAAGTC GCCGCCCGGG GAGGAACCGT GATCGAGTGT
AATATCGGTC CGACAGCCTA TGCTGACGTG ACCTCCATCC GATTTGACGG AGCCGCGGAA
GAAATCCTCC CCCTCCTCGC TCAGCAACTC CTCGGTAGAC AATGA
 
Protein sequence
MSLPDTKTLA AAATAIRDSR CTVAFTGAGI SVPSGIPDFR SPGGLWSRYD PEQVCSEWAL 
RKNPVGVWEF LRDALELFDT ATPNQAHIAL AELEQQGLLS AVITQNIDNL HQEAGSQEVI
EYHGNCRRYY CHGCAASYPS DQIAAQVRRK IPVLCASCEA VIRPDVVFFG EAIPQEALFR
SAALAREADV MIVVGTSGTV APANIIPQEV AARGGTVIEC NIGPTAYADV TSIRFDGAAE
EILPLLAQQL LGRQ