| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2491 |
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| Symbol | |
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| ID | 8420353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2855672 |
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| End bp | 2856679 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645039094 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_003199351 |
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| Protein GI | 258406609 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTTGA AGACAGGTTT GGATTCACCC CGCAGTCAAA TGAACACCCG TTTTTGGCAA
ATCGCCTTCG TTATCCTGGT TCTCGGCGTC CTCGGTATCG TTTATTTCGC CTCGAGCTCC
GTGGAGTATA CGTGGCGTTG GTATCGGGTT CCCCAATATT TTTATTTTCA GGACGACGTC
CAGGTCGATG CCGAGATTGA AGGCACCGTC GAGACCATCA CCTCGACGGA GAAGGAACCT
GTGGTCGTGC TGGAGGGATT GTCCGGGGAG ACAGAACGCT ATCCGGTGCC TGGTGGTGAG
GTCCTGATTT ATGAAGGGGA CTATATCTAT CCGGGGGATA CGCTCGGGAC CTATCAGGAG
GGCAAACCGG GCATTTTGCT CCAGGGGCTC TGGATCACGC TCAAAGTATC GGTGGTCGCC
ATTATTCTGG GGATTGTCCT CGGGGTCTTG ACCGGCCTGT CCCGCATATC CTCCAACCCG
GCCCTGCGCT GGTCTGCCAT CACCTATATC GAGATCATCC GTGGTTCGCC CCTGCTGGTG
CAGATTTTTC TCTGGTATTT TGTGATTGGA ACTCTGGTCA ATTCGATTTT GGCCCAAAAC
GGGCTGGGCC AGATTTCGCC GCTGTGGTTC GGGATTATTT CCCTGGCCGT CTTCACCGGC
GCGTACGTGG CGGAGATTGT CCGGGCCGGT ATCCAGTCGG TCAGCAGGGG GCAGATGGAG
GCCGCGCGCT CCCTCGGGAT GACCTACACC CAATCCATGC GCAAGGTGAT CCTGCCCCAG
GCCTTCAAGC GCATCCTGCC GGCACTGGCC GGACAATTCA TCAGCCTGAT CAAGGATTCG
TCGCTGCTCG GGGTCATCTC TGTCCGGGAA CTTACGAAAG CGACTCGGGA AGTGGTGACG
TCTTCGCTGC AACCCTTTGA ACTCTGGATC ACCTGTGCGG TGCTCTATTT GCTGCTGACG
TTTACCTTGT CGCTTGTCGT GCAGTACATT GAACGCAAGG CGGTGTAG
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| Protein sequence | MALKTGLDSP RSQMNTRFWQ IAFVILVLGV LGIVYFASSS VEYTWRWYRV PQYFYFQDDV
QVDAEIEGTV ETITSTEKEP VVVLEGLSGE TERYPVPGGE VLIYEGDYIY PGDTLGTYQE
GKPGILLQGL WITLKVSVVA IILGIVLGVL TGLSRISSNP ALRWSAITYI EIIRGSPLLV
QIFLWYFVIG TLVNSILAQN GLGQISPLWF GIISLAVFTG AYVAEIVRAG IQSVSRGQME
AARSLGMTYT QSMRKVILPQ AFKRILPALA GQFISLIKDS SLLGVISVRE LTKATREVVT
SSLQPFELWI TCAVLYLLLT FTLSLVVQYI ERKAV
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