| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2488 |
|---|
| Symbol | |
|---|
| ID | 8420350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 2853180 |
|---|
| End bp | 2853977 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645039091 |
|---|
| Product | 6-phosphogluconolactonase |
|---|
| Protein accession | YP_003199348 |
|---|
| Protein GI | 258406606 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGATT GTACGCCTCT TGTCCTTCCG GAACGGGACA GCGCGACCTG GTTGTGCCAT
TTCCCCCGCG CCGCTGATTT GGCTCCCAGC GTTGCTGAAT TTTTGATCCA GCGCGCTTTT
GAGGCCGTCG AGGACCACGG TGCGTTTGTC CTTGGCATTT CTGGAGGAAG CACTCCTTTG
GAGCTTTTCT CCCTTTTGGC TCAACCGCAA TGGCATCCGC GGTTGCCGTG GGACAAGATG
GCGCTCTTTT GGGTCGATGA GCGGTGGGTT GCCTATGGCC GGGAGGACAG CAATTTCGGT
CAGTTCAGGC GCCGTTTTCT GAATCAAGCC CCCCACGGTC CGGCCGGCAT GTACCCCATG
CCAGTCAGCG GCTGTCATCC GGCAGCCGAT ACCCAGGCCT ATGCCGCTGT TTTGGAGCGG
TTTTTCGGTC CTGGGCCGCT GCCGGTGTTC GACTGCCTCC TGCTCGGATT GGGCCACGAC
GGACACACGG CCTCGCTTTT TCCCCATTCC CCGCTTTTGC AGGAACAAAA CCATTGGGTC
GTGACCGTAC CGCCTTCCGT GGCCGCGGTG CCCAATCTGC CGCGCCTGAG TCTGAGCTTG
CCGGTTTTGA ACAAAGCCAA AAATATCGCC TTCCTTGTCT CTGGAGAGCG CAAGGCCGCG
ATCACCACCG AAGTTCTGCA CTCCAGGCCA GATCCCCGCC TGCCCGCCAC CCTAGTCCGC
CCTGACGGCG AGTTGTACTG GTTTGCCGCA GGAATGGATT TTTCTTCGGA TTTGCAAGAA
TCTGTCGAGC AGCGCTGA
|
|---|
| Protein sequence | MSDCTPLVLP ERDSATWLCH FPRAADLAPS VAEFLIQRAF EAVEDHGAFV LGISGGSTPL
ELFSLLAQPQ WHPRLPWDKM ALFWVDERWV AYGREDSNFG QFRRRFLNQA PHGPAGMYPM
PVSGCHPAAD TQAYAAVLER FFGPGPLPVF DCLLLGLGHD GHTASLFPHS PLLQEQNHWV
VTVPPSVAAV PNLPRLSLSL PVLNKAKNIA FLVSGERKAA ITTEVLHSRP DPRLPATLVR
PDGELYWFAA GMDFSSDLQE SVEQR
|
|---|
| |