Gene Dret_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2483 
Symbol 
ID8420345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2848929 
End bp2849297 
Gene Length369 bp 
Protein Length122 aa 
Translation table11 
GC content51% 
IMG OID645039086 
Producttransmembrane protein 
Protein accessionYP_003199343 
Protein GI258406601 
COG category[S] Function unknown 
COG ID[COG3671] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.226347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTT CCGGCGGACG TTGGGAAACG ATTCCTGACA GGGGAGCGGC ACTGCAGACT 
TCCCGAAAAC TGACCTGGTT GACGTATATT CTCTACGCGG CCTCCCCGGT TTTCGGTATT
ACGGCGATTG TTGCTATCGT TTTGAATTAT ATTAAAAAAG ATGATGTCAA AGGGACTTGG
CTAGAAAGCC ATTTCCGTTG GCAGATCCGG ACCTTCTGGT GGGGACTTCT TTGGATCAGC
CTGGGGTCGA TTACCGCTGT GGTCTTCATC GGCATCCCAA TTCTCTTTGC TGCCACAGTC
TGGCTGATCT ACAGAGTGGT GAAGGGCATG GTCTATCTCT ATGACGAACG GGTGTTACCG
CTGCCGTAG
 
Protein sequence
MAFSGGRWET IPDRGAALQT SRKLTWLTYI LYAASPVFGI TAIVAIVLNY IKKDDVKGTW 
LESHFRWQIR TFWWGLLWIS LGSITAVVFI GIPILFAATV WLIYRVVKGM VYLYDERVLP
LP