Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2472 |
Symbol | |
ID | 8420334 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2833079 |
End bp | 2835463 |
Gene Length | 2385 bp |
Protein Length | 794 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 645039075 |
Product | DNA gyrase, B subunit |
Protein accession | YP_003199332 |
Protein GI | 258406590 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000184576 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000743586 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGGAAAAAA ATCAATACAC CGCAGACAGC ATCACGATTC TCGAGGGCCT TTCCGCGGTC CGCAAGCGCC CAGCCATGTA CATCGGATCC ACGGATCTGC AAGGGTTGCA CCACCTGGTC TATGAAGTGG TCGACAACGC CATCGATGAG GCCATGGCCG GGTATTGCAA CCGGGTCAAG GTGACCATTC ACCTCGACAA CAGCGTGACC ATCTCCGATG ACGGCCGCGG AATTCCTGTG GATATGCACC CCAAACAAAA CAAGCCGGCG GTTGAGGTCG TTATGACCGT TCTGCACGCC GGTGGGAAGT TTGATAACGA AACATACAAG GTTTCCGGTG GATTGCACGG CGTAGGTGTG TCTGTGGTCA ATGCCTTGTC CGAATACCTC GAAGTGACTA TCCAGCGCTC GGGAACCAAA TACCACCAGC GCTATGAACG CGGTCTGCCC AAAAGCGAAC TCGAAGAGCG CGGCCCGACC CACCGTACCG GGACCACCAT CCGTTTTCGT CCTGACGAAG AAATATTCGC CGACCTCAAT TTCACCGCCG CAACCTTGAC CAAGCGGTTC GAAGAATTGG CCTATCTCAA CAGTGGTCTG GAAATCGCGT TTTTCGACGA ACGAACCCAG GAAAGCCAAC GTTTTAAATA CGACGGGGGA ATCCGGTCCT TTATCGAAAA TCTCAACGCC GATGAAGGGG CTTTGCATTC GATCGTTTAC GGGCACGGGG AGGTCGAGAA TGTGGCCATC GAATTCGCCC TGCAATACAA CGGCGGGTTC AAAGAAAATG TCCATTCCTT TGCCAACAAT ATCCGGACCA AGGAGGGCGG CTCGCACCTC TCAGGTTTTA AGACGGCGCT GACCCGGAAT ATCAATACCT ACCTTCTTCA CGCTGATCTT CCCAAGAAAT TCAAGACCAA GATTACCGGC GACGATGTCC GTGAGGGGCT GACGGCCGTG GTCTCCGTGA AACTCCCCAT GCCCCAGTTT GAGGGGCAGA CCAAGACCAA ACTCGGTAAC AGCGAAGTCG CCGGCCATGT GGCCTCTGTA ATCTCCTCCC ATCTAGGCAC CTATCTGGAA GAAAACCCCA AGGACGCCAA AGCAATCGTC GAAAAGATCG TTGATGCCGC CCGAGCCAGG GATGCAGCGC GCAAGGCCAA AGACCTGGTC CGCCGCAAAT CCGCCTTGGG CGACAACGCC CTGCCTGGAA AACTCGCCGA CTGTCAGAGC AAGGACCCCA AGGAGAGTGA ACTCTTTATC GTTGAGGGCG ATTCGGCAGG TGGTTCGGCC AAGCAGGGAC GGGACCCGAA ATTCCAGGCC ATTTTGCCTC TGCGGGGCAA GATTTTGAAT GTCGAAAAGA CCCGTTTTGA CAAAATGCTT GAAAATAAAG AGATCAAGCA TCTTATCACC GCCATGGGGG CCGGAATCGG TGAAGAGGAA ATCAACCTCG AGAAACTGCG GTATCACAAA GTCATCATTA TGACCGACGC CGATGTTGAC GGGGCTCACA TCCGGACCCT GCTGTTGACC TTCTTTTTCC GGCAATACCC GCAATTGATC GAGCATGGCT ATCTGTATAT CGCGCAACCT CCGTTGTACC GGGTGCATAA GGGAAATTTC GAACGTTTTC TTTCCACGGA AAACGAACTC AAACAATACC TCATGCAACG CATCAGCGAT GAATTAAAGG TCACGACACC TTCTGAGCAC GCCTTTGAAG GGCAAGCCCT AGTGCAATTG CTGGATTCTA TTGTCGCTTT GCAAGATAAA ATGCGGGATG TGGCCAACTT CGGCGTTCAA GAGGATCTGT TTTGGGATAT ACTCCAATAC GGACAGCGCT TGCGTCCAGA GACGTTGCGC GATTCGGAAC TCTATACACC GTTTTTTGAA TATATGGAGC AGCTCGGCTA CGATCTTGAG GTTGAGGAAG AAGAAGAGGA AGAAGAAAGC CGTTGGTATT TGAATATTAT CGATCGCAAT GACCACCGGG TCCATCTCGG TATCGAGTTC TTCAACTCAA AGCTCTATAA AATTGCCTAC CAAATTCTTG ATGAGCTCAA ATCGCACAGT CCCGAACTCA TTTTCACGGT CACCAGCAAG AGTACAAGTC TGGATATCGA CTCCCCATTT GGCCTTCTGG AGCATGTCCT TGCGGAAGCG GACAAGGGCA TAAATGTCCA GCGGTATAAA GGGTTAGGGG AAATGAACCC CAAACAATTG TGGGAGACCA CGATGGAGCC CGATGACCGC ATGCTGCTTC AAGTCGATAT TGAAGATGCC GCGGAAGCCG ACAGTATTTT CAGTAAATTG ATGGGAGATA AAGTCGAACC CCGCCGGGAT TTCATCGAGC GCAATGCCTT GAGTGTCGAT GAATTGGATA TCTAG
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Protein sequence | MEKNQYTADS ITILEGLSAV RKRPAMYIGS TDLQGLHHLV YEVVDNAIDE AMAGYCNRVK VTIHLDNSVT ISDDGRGIPV DMHPKQNKPA VEVVMTVLHA GGKFDNETYK VSGGLHGVGV SVVNALSEYL EVTIQRSGTK YHQRYERGLP KSELEERGPT HRTGTTIRFR PDEEIFADLN FTAATLTKRF EELAYLNSGL EIAFFDERTQ ESQRFKYDGG IRSFIENLNA DEGALHSIVY GHGEVENVAI EFALQYNGGF KENVHSFANN IRTKEGGSHL SGFKTALTRN INTYLLHADL PKKFKTKITG DDVREGLTAV VSVKLPMPQF EGQTKTKLGN SEVAGHVASV ISSHLGTYLE ENPKDAKAIV EKIVDAARAR DAARKAKDLV RRKSALGDNA LPGKLADCQS KDPKESELFI VEGDSAGGSA KQGRDPKFQA ILPLRGKILN VEKTRFDKML ENKEIKHLIT AMGAGIGEEE INLEKLRYHK VIIMTDADVD GAHIRTLLLT FFFRQYPQLI EHGYLYIAQP PLYRVHKGNF ERFLSTENEL KQYLMQRISD ELKVTTPSEH AFEGQALVQL LDSIVALQDK MRDVANFGVQ EDLFWDILQY GQRLRPETLR DSELYTPFFE YMEQLGYDLE VEEEEEEEES RWYLNIIDRN DHRVHLGIEF FNSKLYKIAY QILDELKSHS PELIFTVTSK STSLDIDSPF GLLEHVLAEA DKGINVQRYK GLGEMNPKQL WETTMEPDDR MLLQVDIEDA AEADSIFSKL MGDKVEPRRD FIERNALSVD ELDI
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