| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2471 |
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| Symbol | |
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| ID | 8420333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2831894 |
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| End bp | 2833075 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 645039074 |
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| Product | DNA polymerase III, beta subunit |
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| Protein accession | YP_003199331 |
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| Protein GI | 258406589 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
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| TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000269887 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000186716 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTTAGTAA GAATCAGTAA AGAACAAGTT CTCTCTGGAT TTCAAAAGGC AGCCGGCATC
ATCCCCATGA AAACTGGAGC GGCTTTTTTG CGCACCATTT GGCTTGAGGC CAAAGACAAC
CACCTCACGA TCATGTCCAC GGACTCCAAA CTCGAATTCA GCGGCAGTTA TCCGGCCCAG
GTCGAAACTC CCGGCTTGAT CGGAGTCCCA GGGAAAAAAT TCTACGACCT GTTCCGGAAA
CTTCCTCCCG GCGAGATCAC CCTGCATGCA GCGGACAGCG AGGACCACGT CCTTTTGGAG
CAGGGAAGGC GCAAATACAA ACTCCCGACC AACGACGCCT CATGGTTTCA ACCTTTTTCC
GCCTTTCCCG AGGATGAGGC GGTGCTGTGG TCCGGGGATT TCCTCAAGGA AATCATCAAC
CGTATCACGT ATTGCGTAGC GGACGACGAA AGCATGAACG GCATGAATTG CCTCAAGATC
ACCCCTTGGC CCAACAGCGA GGCTGTGGAG GCCTGTGGTC TCAATGGGCA CCAATTCGCG
CTGATGCGCT TTTTAAATCC CGATATCCAT GCTATCTTGC CTCAAGACGA TGAGGGGGAG
GACAGCGGCA TTCTCATCGC GAAAAACTAC CTCCTGGAAC TCAAAAAATG GCTCAGCAGC
GATGAGATCT ATTTCACCAT CGATCAAAAG CGCCTTTTTT TCACCAACGG CAAGAAAAAC
GAAATTTTCA GTCTCCCGCT GAGTACGTAT AAATTTCCCA AGTATGAAAC TTTCTTATCA
AATTTCCAGA ACGAAACCTC GAAGCTGAAC ATCGGGCGCG ACGAGATCCT GGATGCCCTT
GAGCGGGTGG CCCTGTTTAA CACCGAAAAT CAGCGCTGCT CCTACTTCGT TTTTGATTCC
ACCGAAATGA TCGTGTATAG TCAGGGGCAG GAAACAGGGG AAGCGACGGA ATCCTTGGGC
GTTGAGTACA GCGGGGATCT CAAGAAAATC GCTTTTCCCA CAACCACTCT GATCGAAGTC
CTCTCTCATT TCCAATCCGA AATGATCACC TTCGAATTCA CCGGGGTTGA AGGCCCTTGT
AAGATCACTG GGAAAGAGGA TTCAGGCTAT CTCGTGGTGG TCATGCCCAT GCATGTCGCC
GAGGAAACCT ATTACGTCGA AGAAGAAACG GAAAACGACT AA
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| Protein sequence | MLVRISKEQV LSGFQKAAGI IPMKTGAAFL RTIWLEAKDN HLTIMSTDSK LEFSGSYPAQ
VETPGLIGVP GKKFYDLFRK LPPGEITLHA ADSEDHVLLE QGRRKYKLPT NDASWFQPFS
AFPEDEAVLW SGDFLKEIIN RITYCVADDE SMNGMNCLKI TPWPNSEAVE ACGLNGHQFA
LMRFLNPDIH AILPQDDEGE DSGILIAKNY LLELKKWLSS DEIYFTIDQK RLFFTNGKKN
EIFSLPLSTY KFPKYETFLS NFQNETSKLN IGRDEILDAL ERVALFNTEN QRCSYFVFDS
TEMIVYSQGQ ETGEATESLG VEYSGDLKKI AFPTTTLIEV LSHFQSEMIT FEFTGVEGPC
KITGKEDSGY LVVVMPMHVA EETYYVEEET END
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