| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2470 |
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| Symbol | |
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| ID | 8420332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2830406 |
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| End bp | 2831761 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645039073 |
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| Product | Chromosomal replication initiator DnaA domain protein |
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| Protein accession | YP_003199330 |
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| Protein GI | 258406588 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0593] ATPase involved in DNA replication initiation |
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| TIGRFAM ID | [TIGR00362] chromosomal replication initiator protein DnaA |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0000450435 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000021733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCTGCAA ACAAACCGGT TTGGCATCTT CCTGCACATG AACTGAAATC CATCGTGCGT
TCCCATCTGG CGCAAACCCG CTCTGAAACT GAAATCAGGC GCTGGTTTGA CCCGCTCGAT
TTCACCGTCC GTTCACAACC GTTCACCCTT GTTATCGGCT TTCCCCACGC CTTTTTCCAC
GACCCTTTCA TTGCAGCCTT CCAGACCGAT TTCGAGCAGG CGGTGGCCGA CACGTTGGGA
AGCGCCACGG CACTGCGCTA CGCCTGCCCG CAACCAGGAG GAAGCACCAC GGCCCAGCAC
GTCTCTTTGG TGGCCCCGCG CAAGCACACG CCTCCCACCA ATGGTTCAGA CAGCTACACT
TTTGAAAATT TTCTAACAAA TAAAAAAAAT TACTTTCCCT ACGCCTCGGC CCGTGAGGCC
ATCGCTGCGC CGGGGAAAAA ATACAACCCC CTCGTCCTGA GCGGCGGCTC CGGAACCGGC
AAAACCCATC TCTTAAAAGC GATGGCCCAG GCCTTTCGCG ATCGGTTTCC GGAACAAAAA
ATTCTCTATT TTACGGTCGA CGATCTGCAC ACCTTTTACA AAGAGGCCGG TGGGGATATG
GCCCGGAGTT CCCTGATCGC CTCCCACCTC TTGCTGATCG ATGACCTGCA GTCGCTGCAG
TTGTACAACT ACCTGCAAAC CGAATTGCTG CTCATTTTCA ACGCCCAATA CGAACAAAGC
GGCCAACTCG CCTTTGCCTG CCGCGGCAAA CTCCCGGAAT GCGGTTTTTT GGAACCAACG
TTGCTTTCCC GTCTGGAATG GGGGCTGATG GTCCATCTCA AGACCCCGGA CCTGGAGCTC
CGCGTCCAAT ATCTGCACAC CGCTAACCAA AAAAAGCGCC TCGGCCTCAG CCGGAGGCAC
ATCTTGCTCC TCGGGCAACA CTTTAAAGAT TTTAGGTACT TACAAGGTGT AATAACAAAG
CTCTGCGCCT ATAAGGAACT CATTTCCCCT GAACTCAACG ACGAGGCGCT GTTTCAGATC
ATCGGCAGCC TGGATTCCAG CAAACCAACA GCCGTGTCTC CCGAACACAT CTTCACCATC
GTCGCCACCC ATTTTGGGAT CACCTACCAG GACCTGCGCG GGGCAAGGCG TCTGCGGAGC
ATTGTTTTTG CCCGGCAAAT AGCCATGGCC CTGTGTCGTT CGGAACTGGG GCTGTCCTAC
CCCCAGATTG GGCGACTCTT TGGGGGTCGC GACCACACCA CCGTCATGCA CGGTATAAAA
AAAGTACAAA AATTACAGAA AATTAACCAT GAAACGAACA CACTTTTCAA CACTTTGAAA
CACCAATGTC ACAGTTTGGC TGAACAACAC CCCTGA
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| Protein sequence | MSANKPVWHL PAHELKSIVR SHLAQTRSET EIRRWFDPLD FTVRSQPFTL VIGFPHAFFH
DPFIAAFQTD FEQAVADTLG SATALRYACP QPGGSTTAQH VSLVAPRKHT PPTNGSDSYT
FENFLTNKKN YFPYASAREA IAAPGKKYNP LVLSGGSGTG KTHLLKAMAQ AFRDRFPEQK
ILYFTVDDLH TFYKEAGGDM ARSSLIASHL LLIDDLQSLQ LYNYLQTELL LIFNAQYEQS
GQLAFACRGK LPECGFLEPT LLSRLEWGLM VHLKTPDLEL RVQYLHTANQ KKRLGLSRRH
ILLLGQHFKD FRYLQGVITK LCAYKELISP ELNDEALFQI IGSLDSSKPT AVSPEHIFTI
VATHFGITYQ DLRGARRLRS IVFARQIAMA LCRSELGLSY PQIGRLFGGR DHTTVMHGIK
KVQKLQKINH ETNTLFNTLK HQCHSLAEQH P
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