| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2463 |
|---|
| Symbol | |
|---|
| ID | 8420325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2824365 |
|---|
| End bp | 2824931 |
|---|
| Gene Length | 567 bp |
|---|
| Protein Length | 188 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645039066 |
|---|
| Product | orotate phosphoribosyltransferase |
|---|
| Protein accession | YP_003199323 |
|---|
| Protein GI | 258406581 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0461] Orotate phosphoribosyltransferase |
|---|
| TIGRFAM ID | [TIGR00336] orotate phosphoribosyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0081584 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCACAACC CCAAGCAGCG TCTGGCGCAA TTACTGCTCG AGAAATCGTA CATCGAAGGG
GAAGTGACCC TCACCTCGGG ACGCAAAAGC GATTACTATT TCGATTGCAA ACAAACCGCC
CTGCACGCCG AAGGCGGCTA TTTGCTGGGA ACTCTCTTCC TGGATCTGTT ACCCCTTGAT
GTTCAGGGGG TGGCCGGGAT GACTCTGGGC GCCGACCCCT TGGTCAGCGC AGTGAGCGTC
TTGTCGCATA TCCAAGGACG TGGACTGCCA GCCTGTATTG TTCGCAAAAA GGCCAAAGGG
CATGGGACCA ATCAGTTTCT GGAGGGGATG GCCAATTTTT CCGATGGGAT GCGCGTTGCA
GTACTCGAAG ATGTGGTCAC CACCGGCGGG AGCCTGTTGA CCGCCTGCGA GCGGGTTGCA
GCGGCCGGGT TGGAGATTAC CGGGGTCTAT TGTGTCCTTG ATCGACTTGA AGGCGGGCGG
GAGCGGTTGC GTGATGCTGG CTATTCCCTG ACGGCACTGT TTACCAGGGA TGAATTGCTC
CGCGCTGGCC GGGGGGAAGA TGTATGA
|
|---|
| Protein sequence | MHNPKQRLAQ LLLEKSYIEG EVTLTSGRKS DYYFDCKQTA LHAEGGYLLG TLFLDLLPLD
VQGVAGMTLG ADPLVSAVSV LSHIQGRGLP ACIVRKKAKG HGTNQFLEGM ANFSDGMRVA
VLEDVVTTGG SLLTACERVA AAGLEITGVY CVLDRLEGGR ERLRDAGYSL TALFTRDELL
RAGRGEDV
|
|---|
| |