| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2460 |
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| Symbol | |
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| ID | 8420322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2821731 |
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| End bp | 2822543 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645039063 |
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| Product | Xylose isomerase domain protein TIM barrel |
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| Protein accession | YP_003199320 |
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| Protein GI | 258406578 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1082] Sugar phosphate isomerases/epimerases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 42 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0967776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGACCT ATTTCGTGAA CCTTCCCTTG CGGTATATAC AAAGTCATCC AAAATACTTG
GATTTTTTTA TCGAGAACGG TCTGGCCCCG GAAATCGGGC TGGACACGGT CTCGTTGCAG
TACGACCTCT CGTGGCACGC GGAGGTTGCC GATCAATTGG CCGCTGCCGG TCTCTCCTGT
GCCGTCCATT TACCGTTCGT CGATCTCCAG CCCGGAAGTC TGGACCCGCT TATTCTGGAG
GCTACCCGGA CCAGGTTGCG TCAAGCCCTC GAAGTAACAG CTGTTTACAA TCCTGAGCAT
CTCATTGGCC ACGCCCACTT CACCCCGATG TATGAGGAGC ATTTTTCTCA ATGGCTGGGA
CGTTCGGTGG TGACCTGGAC CCAATTTCTG GACGGCTGGC CGGATCATCC TCCGTTGTTT
TTGGAAAACA CCTGTGAGCA GGACCCGGGG TTGTTAAATG ACCTCTTGAT CGAACTCAGC
GCCCACGATG TCGGATTCTG CTTGGATATC GGGCATTGGC ACTGCTTTGG AGGGGGATGT
CGCCGCAGCG ATCTCGGACA TTGGCTCCAA TCCCTGAGCG CTTTTTTGCA ACATGTCCAT
CTGCATGACA ACGAAGGGGA GATGGACACC CATCTTGGTC TGGGTGACGG AGGGGTTCCT
TGGGAGGAAT TCTTCGACGG GCTCCAGTAC CTTGAATTGG CCCCGGGCGT GACCCTGGAG
CCGCATTGCC TGGAAGATCT CCAGCGCAGC CAGCGTTTTA TGCAGGAAAA TCCCTCCTGG
TTCTCTCGTC TTGGAGTGAC CGTCCCGGCC TGA
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| Protein sequence | MGTYFVNLPL RYIQSHPKYL DFFIENGLAP EIGLDTVSLQ YDLSWHAEVA DQLAAAGLSC
AVHLPFVDLQ PGSLDPLILE ATRTRLRQAL EVTAVYNPEH LIGHAHFTPM YEEHFSQWLG
RSVVTWTQFL DGWPDHPPLF LENTCEQDPG LLNDLLIELS AHDVGFCLDI GHWHCFGGGC
RRSDLGHWLQ SLSAFLQHVH LHDNEGEMDT HLGLGDGGVP WEEFFDGLQY LELAPGVTLE
PHCLEDLQRS QRFMQENPSW FSRLGVTVPA
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