| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2456 |
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| Symbol | |
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| ID | 8420318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2817806 |
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| End bp | 2818819 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645039059 |
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| Product | Extracellular solute-binding protein |
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| Protein accession | YP_003199316 |
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| Protein GI | 258406574 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCC GTATCGCCTT GTCACTGATG CTCCTCATGG TTTTCCTGGG GACCACTGCC
GTCTCTACCT CAGCCACCAC ATTGACCTAT GCCAATTTTC CTCCCGCCCC CACATTTCCC
TGCGTTCAGA TGGAGCGCTG GGCCGATGAA GTCGAAAAAC GCACCGACGG GGCATTGACC
ATCGAGACTT TCCCCGGTGG CACCCTGCTC GGGGCCAAAC AGATCTGGCG TGGCGTCCAA
TACGGTCAGG CCGACATCGG CTGCATCAGC CTGGCCTACC AGCCGGGTCT TTTTCCTTTG
ATGTCCGTTA TGGAACTGCC ACTCGGGCTT CCTTCAGCTG AAACCGCGAG TACCCTCATG
TGGGATCTCT TTACCAGCTA TTCCCCCGAA GAGTTCGACA AGGTCAAAGT CCTGACCATG
TTCACCTCAG CCCCCTCTAA TATCATGAGC AAAAAACCGC TTCCCGACCT GGCCAGCCTC
CAGGGCGTGG AATTGCGTGG CTCCGGTACC GCGTCCCGCA TCCTCGAGGC CCTGGGGGCC
ACCCCGGTCT CCATGCCCAT GCCGGACACC CCTCAGGCCT TGCAAAAAGG TGTTGTCCAG
GGCCTTTTCT CCTCGCTGGA AGTCCTTAAA GACCTCAATT TCGCCGCCTA TTGCCAGCAC
GTGACCCGTA CCGATCTCCA GGTCTATCCC TTTGCCGTGA TCATGAACAA ACGGGTTTGG
GAGGATTTGC CCGAGTCAAC CAAGAAGATT TTGAACGAGC TTGGACCGGA ACAGGCGGCC
TGGACCGGCC GGTATATGGA CAATCACGTC CAGAAAGCGC TCGCCTGGGC CCAAAAGGAA
CACGGTCTGA CCACCCACGC CTTGTCGGCA ACTGCATTGG AAGCCGTCCA ACCCAAGCTC
GACAAACTCA TTGAGGAATG GGTCCAGGAC GCCTCGGCCA AAGGACTTCC TGCCAAAGCG
GTTTTGCGCG ATATCAGCGC CCGTCTGGAC AAAGCTGAGG CGAAAGGGGA ATAG
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| Protein sequence | MQRRIALSLM LLMVFLGTTA VSTSATTLTY ANFPPAPTFP CVQMERWADE VEKRTDGALT
IETFPGGTLL GAKQIWRGVQ YGQADIGCIS LAYQPGLFPL MSVMELPLGL PSAETASTLM
WDLFTSYSPE EFDKVKVLTM FTSAPSNIMS KKPLPDLASL QGVELRGSGT ASRILEALGA
TPVSMPMPDT PQALQKGVVQ GLFSSLEVLK DLNFAAYCQH VTRTDLQVYP FAVIMNKRVW
EDLPESTKKI LNELGPEQAA WTGRYMDNHV QKALAWAQKE HGLTTHALSA TALEAVQPKL
DKLIEEWVQD ASAKGLPAKA VLRDISARLD KAEAKGE
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