Gene Dret_2454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2454 
Symbol 
ID8420316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2815229 
End bp2816014 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content62% 
IMG OID645039057 
ProductFructose-bisphosphate aldolase 
Protein accessionYP_003199314 
Protein GI258406572 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1830] DhnA-type fructose-1,6-bisphosphate aldolase and related enzymes 
TIGRFAM ID[TIGR01949] predicted phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGGTC TGCAACGCCG GTTTCGCCGG CTTTTCCATG CCCACAGTGG GCGCACGGTT 
CTTGTCCCTC TCGATCACGG GCTGACTGAA GGTCTGTTGC CGGGCTTGGA GCATACGTCG
GCTTTTGTGG ATCATGTGGC CCGCCATGCA GCAGTCCAGG GGGTCGTCCT GCATCAGGGA
GCGGCCGAGG TTTGGGGCGC TCCGCGGCTG GCCCTGGACC AACGTCTTGT GGTCCATCTC
TCAGGCGGGA CGCGCTATGC CGAGCCTTCG TACCGCAAAA CCGGGGTCTG CTCTGTGGAT
CAGGCGCTTC GCAGCGGAGC GGACGCTGTT TCCGTCCATG TGAATATCGG CAACCGCTTT
GAGGGAGAGA TGTTGTCGGA TTTGGCCGCC GTGCGGGAGC GGGCGCATTC TCTTGGCATA
CCAGTGCTGG CGATGCTGTA TGCCCGCGGA CCGGCTGTGG CGGACGATCA GGATCCGGAA
TTGATCGGGC ATTGTATCCG TGTCGGCGTC GAATTGGGGG CTGATGTGGT CAAGGTTGGA
TTTGGGAAGG ATCCGCACGC CTTTGCTGCG CATGTCCGGG CGTGCCCTGT GCCTGTGGTT
ATTGCCGGAG GACCGGCCCA GCCAAACTGG TCAGCGTTTC TCGATATGGT CGCAACAGCT
TTGGACTGCG GCGCGGCTGG CGTTAGCATC GGACGCAATC TTTTTCAGCA TCCTGCCCCT
GGACAGGCCA TCGGGGATCT CTGTCAAATG GTCCACGGGC AAGCAGGGAA CGACTGCCAT
GGCTAA
 
Protein sequence
MAGLQRRFRR LFHAHSGRTV LVPLDHGLTE GLLPGLEHTS AFVDHVARHA AVQGVVLHQG 
AAEVWGAPRL ALDQRLVVHL SGGTRYAEPS YRKTGVCSVD QALRSGADAV SVHVNIGNRF
EGEMLSDLAA VRERAHSLGI PVLAMLYARG PAVADDQDPE LIGHCIRVGV ELGADVVKVG
FGKDPHAFAA HVRACPVPVV IAGGPAQPNW SAFLDMVATA LDCGAAGVSI GRNLFQHPAP
GQAIGDLCQM VHGQAGNDCH G