Gene Dret_2436 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2436 
Symbol 
ID8420296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2790018 
End bp2792828 
Gene Length2811 bp 
Protein Length936 aa 
Translation table11 
GC content59% 
IMG OID645039037 
Productmolybdopterin oxidoreductase 
Protein accessionYP_003199296 
Protein GI258406554 
COG category[C] Energy production and conversion 
COG ID[COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.982452 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.336779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAACA AAACCACCCG TGATCACATC CTGATTTTTC GCTTTTTTTC ACAGATCTTG 
CGCGATGAAG TCCCGTCGAC CTTGTTGGCC GCCATGCAGG CCCCCGCGGT GGCAGATCGC
TTGCGCGATG TGCTGGAGCA CAGCCACCTC CTGGAGGTCG AGCAGGCCGG CAAAGAATTC
GTGGATTTCC TTGTCTCAGC CCCGGCGGCA CAATTGGCGC ATGGGCTTCG TTTTGACTAC
GCCGAACTCT TTCTCAATGT CGGCGCCAAT CCGGTTTTCC CTTACGAATC CTGCCATATG
ACCGGACAGC CGGTGGTACG GCAGAAGAAT ATATTCGCCC TGCGCTCGGC CTACCGGGAA
GCCGGGCTGC GCCCCGCCGG AGACTATTTT GATCTGGATG AACACATCGC GGTCGAGCTC
GATTTTCTGG CGGCGTTACT CCAAAGGGGC CGGGAGGACC AATTCCAGGT CTTTTTTACC
GATCATTTCT CCCCCTGGGC GCTTTGTTTT TGCGAGCAAT TGGCAAGCGC CGCCGCATCG
GTGTTTTATC GCGACGTGGG CATGATTCTG CGCGGCATCC TGCGGTGTAC CCTGGGCTGT
TTGGGCCAAT CGGAAGGTCT GGCAGCGGAC AAAGCCGCAG CCCAATGCCG CCAATTGGCG
GAAGTCATTG AGCAACTCGG TCTCCAGGAA ACGCCCGATC TGGTTGTCCC TGGAGAGGAT
GTTCCTTCAG AGACACAGGA AATTCCCACC CATTGTTACA CCTGTGGGGC GCTGTGCGGT
ATGCGGGCCA AGGTCCAGGA CGGAGTGCTC GTCTCGGTCA GTGGCTTGCC CGGCGACCCC
AAAGGCGGCG GGCGTTTGTG TCCCAAAGGC GGGGCGGCTC CGAAGCACCT CTATTCGGCC
TACCGCCTCA AAACGCCTTT GGTAAAGGAA GACGGCCGCT TCCGGAAGGC GAGCTGGGAC
GAGGCCTTGG ACCGTGTGGT CCAAGGCATC CGCGAAACGC CGCAGGGTCA GTTGGGCTAT
TTTCGCGGCA ATGATTTCTG CAATTGGATC CACGAAGCCT TGTTCGATCA TCTGGGGTGC
CCGAAAGGGA CCCACCGGAC CATGTGTGAT AACGCCAACC GGATGTGGAC CGAGCATTGC
GTGAACGACA AGCGGCCGTG GCTCAATTAC GAAGAGGCCG ATTATATCCT CCATTTCGGT
ATGAACGAAC TGGCGACCTC CTACGGGCAG CGGAAGACTG CGGAACTCAA ACAGGCCCTG
AAACGCGGCG CCAAACTTGT GGTCTTTGAC CCTCGCAAAT CCGACACCGC GGCCAAGGCG
AACGAATGGA TTCCGATCAA GCCAGGGACC GACGGCGCCG TGGCCATGGC CATGGCCCAT
GTCCTGCTGA GTGAAGCGTT GTACGATCAG GAATTTGTCC AGGAATGGAC CTACGGCTTC
GAGGCGTTCA AAGCCCGGGT CCTTGGACAG GAAGACGGTG TAGCGCGGAC CCCGCAATGG
GCCGAAAGCA TCAGCGGCGT GCCGGCCGAG ACCATTGCCC GCATCGCCCG GGAATTCGCC
GCAGCCAAGG CCAAAGGGGC TTTGTCCTGG ACCGGGCTGG CCCAGGTGCC CAACGGCTAC
TGGTCCACCG GCGCTGTCCA GGCCCTGAAT GCGCTGTGCG GGACATACGA TGCCCCGGGA
GGGCCTTCAT TGCCATTTAA GCGCAAGCTC AAACCGGCCT GGGGCGAGGG ACAGACCAAG
CCCCCGAAGA CCGACGCGCC GAAACTGGAC AGTTTCAGCA TGTGGTCAGG ATGGTCGCCC
GCGGTTTTCG AACAGGATAT CGATGCCGGC CGTCTGACCG GGATGGTCGG ATACTGGGGA
GATCCGGTGC TGTCCTGGGG CAATTCGGAA TCGGTCCGCC GCGGATTGGA CAAAATGGCC
TTCAAGGCCA TGATCGAGGC GTTCATGTGC GACACCGCTT TGCAATGTGA CGTGATTCTC
CCGGACGCCA CCTGGTTGGA ACAAAGCCAA GTCAAGCCGG ATTGGCTGTA TGAGGCCTTT
ATCGGCTATT TTGCCGAGGT CGTCCCACCG ATGTACGACA CCAAGCCGAT GTGGCGGATC
ACCCAGCTCT TGGCCCAGCG GCTTGGATTA GGGCACTACT TCCCATGGAA TGATGTGGAG
GAAGCCTTCG CCAATATGTT CGCCGGGACG CCGTGGTCTT TTGAGGAGCT CAAGGCCAAG
GGATTTCTCC TCACCGACCA GGCGGCGTAC TACAAGTACA AGGAATGGGG TGGCTGCAAT
CCTCCTGAAG GATATGGTTC GTCTGGCACG AGCAAGACGG GGAAATTCAA CCTGAAAAAT
CCGGTAGCCG AGGAGAAAGG GGTTGATGCT TTACCGGATT ACAAGGCCCC CGCAGCCGAA
TTGACGGCAG ATGAAAAGTA TCCCTTTATC TTTGGCAATT TCCGTCTCTT CCAGCACGAA
CATTGTTCGA CGTTCAACAA TTTTCAGCTC ATGAAATTGC AAGGGACCAA TACGTTGTGG
ATCAATGACA GCGATGCCCA GGGGCTGCAG ATCGTTCAGG GGGACCAAGT CCGGGTCCAA
TCGCCCTGGG GCGAGGTGGT CATGCAGGCC AATCCCACGG CGGACATTGC CCCCGGGGTT
TTGGCGGCCG CTGGTGGGTT CGGGCACAAG CGGGGTCTGG AAGGCGATCC CAAATTCCCT
CATGTTGGGG GCGTTAATGC CACCGGTGAA CTCCAGAAGC CGAATACACC GGAAGCCGTT
GGCGGGACGC CGCTTTTAAA ATATATCAAG ACACGAGTCG AAAAAGTCTG A
 
Protein sequence
MHNKTTRDHI LIFRFFSQIL RDEVPSTLLA AMQAPAVADR LRDVLEHSHL LEVEQAGKEF 
VDFLVSAPAA QLAHGLRFDY AELFLNVGAN PVFPYESCHM TGQPVVRQKN IFALRSAYRE
AGLRPAGDYF DLDEHIAVEL DFLAALLQRG REDQFQVFFT DHFSPWALCF CEQLASAAAS
VFYRDVGMIL RGILRCTLGC LGQSEGLAAD KAAAQCRQLA EVIEQLGLQE TPDLVVPGED
VPSETQEIPT HCYTCGALCG MRAKVQDGVL VSVSGLPGDP KGGGRLCPKG GAAPKHLYSA
YRLKTPLVKE DGRFRKASWD EALDRVVQGI RETPQGQLGY FRGNDFCNWI HEALFDHLGC
PKGTHRTMCD NANRMWTEHC VNDKRPWLNY EEADYILHFG MNELATSYGQ RKTAELKQAL
KRGAKLVVFD PRKSDTAAKA NEWIPIKPGT DGAVAMAMAH VLLSEALYDQ EFVQEWTYGF
EAFKARVLGQ EDGVARTPQW AESISGVPAE TIARIAREFA AAKAKGALSW TGLAQVPNGY
WSTGAVQALN ALCGTYDAPG GPSLPFKRKL KPAWGEGQTK PPKTDAPKLD SFSMWSGWSP
AVFEQDIDAG RLTGMVGYWG DPVLSWGNSE SVRRGLDKMA FKAMIEAFMC DTALQCDVIL
PDATWLEQSQ VKPDWLYEAF IGYFAEVVPP MYDTKPMWRI TQLLAQRLGL GHYFPWNDVE
EAFANMFAGT PWSFEELKAK GFLLTDQAAY YKYKEWGGCN PPEGYGSSGT SKTGKFNLKN
PVAEEKGVDA LPDYKAPAAE LTADEKYPFI FGNFRLFQHE HCSTFNNFQL MKLQGTNTLW
INDSDAQGLQ IVQGDQVRVQ SPWGEVVMQA NPTADIAPGV LAAAGGFGHK RGLEGDPKFP
HVGGVNATGE LQKPNTPEAV GGTPLLKYIK TRVEKV