Gene Dret_2432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2432 
Symbol 
ID8420292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2785642 
End bp2786928 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content59% 
IMG OID645039033 
ProductPhenylacetate--CoA ligase 
Protein accessionYP_003199292 
Protein GI258406550 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1541] Coenzyme F390 synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.028462 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCTACA GCCCCAAAGA AGGCTGGTCC CAAGACGCCT TGGGCGCAAC GCAGGTCAGC 
CGCCTGCGCG AAACCTTGAA GCAGGCCGCC AAGTCGCCCT TTTACCATGC ACGGCTGGCC
GAGGCCGGCG TCTCTCCGGA AACCATCCGT TCCCCTGAGG ACATCCGGCG CCTGCCGCTG
ACCACCAAAG ACGACCTGCG CAGCGCCTAC CCCATGGGCA TGTGCAGTGT GCCAAGCCGC
GAACTCATCC GTCTCCACGC CTCTTCCGGC ACGACTGGCA CCCCCACGGC GATTTTGTAT
ACCAAAAACG ACATCCAGAA CTGGGCTTCG CTGATGGCCC GGAGCTTGTA TGCCGCTGGG
GTTCGACCCG AGGACGTCTT TCAGAACACC TCCGGATACG GCCTTTTCAC TGGAGGCCTC
GGCATCCATT ACGGGGCTGA AATGCTGGGT TGCCTGACCA TCCCCGCCGG TTCCGGCAAT
ACCAAACGGC AGCTCAAACT CATCCGCGAT TTCCAGGTCA GTGTGGTACA CATCATCCCC
TCCTATGCCC TGTATATGGG ATCGGTCCTG GTCCAGGAAG GAATCGATCC CCGCGAATTG
CCCATCTCTC GGGCGGTTAT CGGCGCCGAA CCGCACACTG AGGCGGTGCG GAGCAAAGTG
GAATCTCTTT TGGGCCTCAA GGCCTTCAAT TCCTATGGAC TGTCTGAAAT GAACGGTCCC
GGTGTGGCCT TTGAGTGCGA GGAACAAAAC GGGATGCATG TCTGGGAGGA CGCCTTTGTG
GCTGAAATCC TGAACCCCGA AACCCTGGAA CCGGTGGATG AGGGCGAAAT CGGCGAATTG
GTCATGACGA CCTTGACCCG GGAAGGGATG CCTCTTGTGC GCTACCGGAC CCGGGATCTG
ACCCGCTTTA TACCCGGGCG CTGTCCTTGC GGACGCACCC ACCGGCGCAT CGACCGCATC
AAAGGACGAG CCGATGACAT GCTGATCATC AAGGGCGTCA ATATCTACCC CATGCAGATC
GAACAGGTCC TTATGAACAT CCGGGAAGTG GGACAGAATT ACGTTATTGA AATTTTCCAG
GACCGGGAAA TGGACCAGAT GCGGATCAAG GTCGAGATCC GGGACGAGTA TTTCGTGGAG
GACATGCGCG CCCTGCAAGC CCTGCAGCGG CGGATCGCCT CTTTGCTGCG CAACGAAATC
CTGATCACAC CAAAAGTGGA ACTCGTTCAG CACAACTCTC TGCCCCAGAC CCAGGGCAAA
GCCCAGCGGG TGGTCCGCCT GGACTGA
 
Protein sequence
MFYSPKEGWS QDALGATQVS RLRETLKQAA KSPFYHARLA EAGVSPETIR SPEDIRRLPL 
TTKDDLRSAY PMGMCSVPSR ELIRLHASSG TTGTPTAILY TKNDIQNWAS LMARSLYAAG
VRPEDVFQNT SGYGLFTGGL GIHYGAEMLG CLTIPAGSGN TKRQLKLIRD FQVSVVHIIP
SYALYMGSVL VQEGIDPREL PISRAVIGAE PHTEAVRSKV ESLLGLKAFN SYGLSEMNGP
GVAFECEEQN GMHVWEDAFV AEILNPETLE PVDEGEIGEL VMTTLTREGM PLVRYRTRDL
TRFIPGRCPC GRTHRRIDRI KGRADDMLII KGVNIYPMQI EQVLMNIREV GQNYVIEIFQ
DREMDQMRIK VEIRDEYFVE DMRALQALQR RIASLLRNEI LITPKVELVQ HNSLPQTQGK
AQRVVRLD