Gene Dret_2420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2420 
Symbol 
ID8420280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2770039 
End bp2770449 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content57% 
IMG OID645039021 
Productcytochrome c class III 
Protein accessionYP_003199280 
Protein GI258406538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000311194 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGGAAAT CACTGTTTGT CGCTCTGGTG TGCTCCGCTT TGGTCTGCGC GTTTGTGCTG 
CCGAATCTGA GTGCAATGGA AGCCCCCGGG GACATGGTCC TGAAGGCTCC CGAAGGCGTG
AAAGCCCGGT TCAGCCCGGT GGAGTTCTCC CACGATGCGC ACAGCGCTCT GGATTGTGAG
TCCTGCCACC ATATGCTGGC TGAGAACCCC GACAACTACA ACTGCATGAC TGAAGGGTGC
CACGATCTCT TCAACCCCAC CAGCGTTGAA GAGAAAAAGG ACATCGCCTA TTTCTACAAT
GCATTCCATG ACCGCCGCAG CGAACACAGC TGCCTGGGCT GCCACATGGC CAAGAAAAAA
GCCGGCGAAA CCACCGGTCC TTTGGCCTGC ACGCAGTGCC ACCCGAAATA A
 
Protein sequence
MRKSLFVALV CSALVCAFVL PNLSAMEAPG DMVLKAPEGV KARFSPVEFS HDAHSALDCE 
SCHHMLAENP DNYNCMTEGC HDLFNPTSVE EKKDIAYFYN AFHDRRSEHS CLGCHMAKKK
AGETTGPLAC TQCHPK