Gene Dret_2407 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2407 
SymbolargC 
ID8420267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2755702 
End bp2756757 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content66% 
IMG OID645039008 
ProductN-acetyl-gamma-glutamyl-phosphate reductase 
Protein accessionYP_003199267 
Protein GI258406525 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0002] Acetylglutamate semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01850] N-acetyl-gamma-glutamyl-phosphate reductase, common form 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0769456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGTA TCCCCGTAGG CCTGGTCGGT GTTACCGGCT ACGCCGGCAT GGAATTGGTC 
CGGCTCTTGG CGGGACACCC TGATCTTGAA CTGGTTCAAG CCACCTCACG CCAGCACGCC
GGAACTCCGC TGGGCCAGCT CTACCCCTTT CTGCACGGAC GTCCGGAGGC AAAAATCGTG
GTCCAATCCC CGGATTCCGC GACACTCGCC GCCGCATGTC GGCTGGTCTT TCTCGCCGTT
CCCCACGGGG CGGCCATGGA GGTCAGCGCG CAATTGCTCA AGGCCGGCAC CAAGGTCGTC
GACTTGAGCG CTGATTTTCG CCTCAGGGAC CCGGAGGTCT ATGCAAAGTG GTACGGGCTG
CCCCATCAGC AGCGCGCCCT GCTGGAAGAA GCCGTCTACG GCCTGCCAGA ACTTTACGGC
CACAAGGTCA CCGAGGCGAC CAGACTGGTC GCCAACCCCG GCTGCTATCC CTCGGGGATC
ATCCTCGGGC TGGTGCCGGC CCTGCGCGAA GGGGTCATCA GCAGCCGGGA CATTGTCGCC
GATGCCAAAT CCGGCGCGAG CGGGGCCGGG CGCAAACCGT CCACGGGCAC CCTGTATTGC
GAGGTCAGCG ACACCCTGCG CGCCTATGGC CTGGGCACGC ACCGCCACAC CCCGGAGATC
GAGCAGGAAC TTGCCGTGGC TGCCGACTCG CCGGTGACCA TCTCCTTCAG CCCCCATCTG
GTGCCCATGA ACCGGGGCAT TCTGGCGACA AGCTACGGGC GCATGCAGCA ACCGCTGTCC
CTGGAAGAAG TCCATGCCCT GTACACCTCA TGCTACGCCG ACGCCCCGTG GGTGCGTGTG
CTGCCCGAGG GGACCCTTCC GGAGACTCGC TGGGTCCGGG GAACCATGTT TTGCGACATC
GGCCTGGTGG TCGACCGGCG GACGGACCGA TTGCTCGTCG TCACCGCCGT GGACAATCTC
TGCCGCGGCG CTTCCGGTCA GGCCATAGCC AACGCCAACC GCATGCTCGG CCTGGAGCCG
TGCACCGGTC TGGATCTGCC GCCAATGATG CCTTGA
 
Protein sequence
MARIPVGLVG VTGYAGMELV RLLAGHPDLE LVQATSRQHA GTPLGQLYPF LHGRPEAKIV 
VQSPDSATLA AACRLVFLAV PHGAAMEVSA QLLKAGTKVV DLSADFRLRD PEVYAKWYGL
PHQQRALLEE AVYGLPELYG HKVTEATRLV ANPGCYPSGI ILGLVPALRE GVISSRDIVA
DAKSGASGAG RKPSTGTLYC EVSDTLRAYG LGTHRHTPEI EQELAVAADS PVTISFSPHL
VPMNRGILAT SYGRMQQPLS LEEVHALYTS CYADAPWVRV LPEGTLPETR WVRGTMFCDI
GLVVDRRTDR LLVVTAVDNL CRGASGQAIA NANRMLGLEP CTGLDLPPMM P