Gene Dret_2398 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2398 
Symbol 
ID8420258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2743060 
End bp2743965 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content57% 
IMG OID645038999 
Producthypothetical protein 
Protein accessionYP_003199258 
Protein GI258406516 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAAG TCCTGCTTGT ACTTGCTGTT GTCTGTCTGT CACTTGGGTT GGCCGCGAAC 
GCCACTGCCC AGGACAAGGT CCTGAAGATG TCCACGACCA CCTCGACGCA GGCATCGGGG
TTGCTGGATG TTTTGCTGCC GGCCTTTAAA AAGGACACCG GCATTTCGGT CAAGGTCATC
GCCAAGGGCA CAGGCGCCGC AATCCGCGAC GGCCAGGACG GCAACGTGGA TGTGATTTTT
GTTCACGCCA AGAACCGTGA ACAGGCCTTT GTCGAAGAAG GCTACGGGAC AAAGCGGTAT
GCGGTCATGC ACAACGATTT CGTGATTATC GGTCCCAATG GCGATCCAGC CGGAATCAAG
GGCATGAGCG ACGCGCAAAA GGCGTTGGAA AACATCGCCG ACGCCGGCGC TCCATTCATC
TCCCGTGGTG ACGACAGCGG GACGCACACC AAGGAACAGA TCCTGTGGAA AAGCAGCGAC
GTGGCTTTGG AAGAAATCAC CAAGACCATT GTCAAAAAAG GGTCAAAAAC AGAATTGACT
TTTGTCCAGC CGGCGCAGGA AGGCGACACC TGGTACTTCT CCATCGGCCA GGGCATGGGC
AAGACCATCA CCTTTGCCGA GGAAAAACAG GCTTACACGA TGGCCGACCG TGGCACCTAT
CTCAAGTACA AGCTTGGACG CGATGCCGGG CTTGACCTGA CCGTACTCTG CGAGGGCGAC
GAAGACCTGT ACAACCCCTA CGGCGTGATC CCGGTCAATC CGGACCGTTA CCCCCACGTC
CAATATGATC TGGCCAAGCA GTTTGCCCAA TGGCTGGTCT CCGAGCGCGG CCAGTCCCTG
ATCGCGAACT ACAAGCTGCT CGGCAAGCAG CTCTTTTATC CGGATGCGAT GCCGAACGTG
AACTAG
 
Protein sequence
MRKVLLVLAV VCLSLGLAAN ATAQDKVLKM STTTSTQASG LLDVLLPAFK KDTGISVKVI 
AKGTGAAIRD GQDGNVDVIF VHAKNREQAF VEEGYGTKRY AVMHNDFVII GPNGDPAGIK
GMSDAQKALE NIADAGAPFI SRGDDSGTHT KEQILWKSSD VALEEITKTI VKKGSKTELT
FVQPAQEGDT WYFSIGQGMG KTITFAEEKQ AYTMADRGTY LKYKLGRDAG LDLTVLCEGD
EDLYNPYGVI PVNPDRYPHV QYDLAKQFAQ WLVSERGQSL IANYKLLGKQ LFYPDAMPNV
N