Gene Dret_2396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2396 
Symbol 
ID8420256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2741264 
End bp2742277 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content59% 
IMG OID645038997 
ProductABC transporter related 
Protein accessionYP_003199256 
Protein GI258406514 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3842] ABC-type spermidine/putrescine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTTG TCGGGCGCCA TATTCGCAAA ACTTTCGGCC AAAGGCGGGT CCTGGATCTC 
GAGCGCTTTG CCCTTGAGCC GGGACGGATT CATGGCCTGC TCGGCCCCAA TGGGGCGGGG
AAAACAACCC TTTTGCACAT TTTGAGTTTT CTGGACCGCC CTACGAGCGG AACCCTGTTC
TACGACGGGC AACCGGTAGA CTTTCAGTCC CAGAACCAGT TGCGCCGTTT GCGGCGCGAA
GTCATTCTCG TGGACCAGCA TCCCATTTTG TTTACCACCT CGGTGGAGGC CAATGTCGGC
TACGGCCTCA AAGTTCGGGG CGTGCCGAAA ACCAAGCGCC GCCGCCTTGT AGAACAGAGC
CTGGAGTTGG TGGGCATGCG CAAATTTCTG CAGGCCAGGG CGTGGCGCCT GTCCGGTGGG
GAAACCCAGC GGGTGGCCCT GGCACGGGCA CTGGCCTGCT CGCCCAGGGT GCTCTGTCTG
GATGAACCCA CCGCCAGTGT GGACGTGGAA CACCAGATCG CCCTGGAGCG GATCGTCCAG
GACATCCATG CTGAGACCGG GATGACCATC ATTCTCTGCA CGCACGATCA GCGGCTGGCG
GCCAAGCTGG TCCAGAACAC GCTCTACCTC TTTGACGGCC GCGCTAGCCG CAGTCTGTAT
GAAAATGTTT TTTCCGGCCA GGTCCTGACC GGAGAGGACG GCGTCTCCCA GTGCCAGCTC
GGGGCGAATC TCTCACTCCC GGTTTCCTGC GACGATGCCA CACACCTCAA GATTTCTTTG
AATCCTAAGG CACTTGAATT ACTGGAAGGA GCTGCCGAAC CCCATCCCGA TAGCCGGTAT
TGGCCCGGGC GAATCACGCA GATCAGCGAC GCGGGAAAAC ATATCAGGTT CCAAGTGGAT
GTCGGTCTGC CCATCAATGT CCTGTACAAA AAGGCAACTC CGGAACTGGA CAAATGGTGG
ATCGGCCGTG AGACGGTTCT CAGAATTCCC TCTCGTGCGG TCCATATCCT CTAG
 
Protein sequence
MLFVGRHIRK TFGQRRVLDL ERFALEPGRI HGLLGPNGAG KTTLLHILSF LDRPTSGTLF 
YDGQPVDFQS QNQLRRLRRE VILVDQHPIL FTTSVEANVG YGLKVRGVPK TKRRRLVEQS
LELVGMRKFL QARAWRLSGG ETQRVALARA LACSPRVLCL DEPTASVDVE HQIALERIVQ
DIHAETGMTI ILCTHDQRLA AKLVQNTLYL FDGRASRSLY ENVFSGQVLT GEDGVSQCQL
GANLSLPVSC DDATHLKISL NPKALELLEG AAEPHPDSRY WPGRITQISD AGKHIRFQVD
VGLPINVLYK KATPELDKWW IGRETVLRIP SRAVHIL