Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2393 |
Symbol | |
ID | 8420253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 2739216 |
End bp | 2739857 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645038994 |
Product | Peroxiredoxin |
Protein accession | YP_003199253 |
Protein GI | 258406511 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.843671 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA GAATTCCCCT GCTCGGTGAA AAAATGCCCC AGCTCGAAGT GACCACCACC CACGGTACGA TCAACCTCCC GGGCGACTAC TCTGGAAAAT GGTTTGTCCT TTTCAGCCAC CCGGCCGACT ACACGCCTGT GTGCACCACC GAATTTGTCG CCTTCCAGCA GCGCAGCCAG GAATTCAAGG ACATCGGCTG CGAACTCATC GGCCTGTCCA TTGACCAGGT TTTCTCGCAC ATCAAGTGGA TCGACTGGAT CAAGGAAACC TTTGACGTGG ACATCGAATT TCCGGTCATT GCCGACGACA TGGGCAAGGT TGCTGCCCAG TTGGGCATGG TCCATCCCGG CAAAGGAACC AATACGGTCC GTGCCGTCTT CATCGTCGAT CCGCAGGGAG CGCTACGGAC CATGCTCTAC TACCCCCAGG AAGTGGGACG GAACATGGAC GAGATTCTGC GGACCGTGAA GGCCCTGCAG ATGTCGGACA CCAACGGCGT GGCCTGCCCC GCCGGCTGGC CGAACAACGA GATCCTCGGC GATCGGGTCA TCATTCCCCC GGCCACCGAC CACAAAACAG CCAAAGAGCG CAAAGCGCAA TCCGATTGTT ACGATTGGTG GTTCTGCCAC AAAATCGTGT AA
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Protein sequence | MENRIPLLGE KMPQLEVTTT HGTINLPGDY SGKWFVLFSH PADYTPVCTT EFVAFQQRSQ EFKDIGCELI GLSIDQVFSH IKWIDWIKET FDVDIEFPVI ADDMGKVAAQ LGMVHPGKGT NTVRAVFIVD PQGALRTMLY YPQEVGRNMD EILRTVKALQ MSDTNGVACP AGWPNNEILG DRVIIPPATD HKTAKERKAQ SDCYDWWFCH KIV
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