Gene Dret_2393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2393 
Symbol 
ID8420253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2739216 
End bp2739857 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID645038994 
ProductPeroxiredoxin 
Protein accessionYP_003199253 
Protein GI258406511 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.843671 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA GAATTCCCCT GCTCGGTGAA AAAATGCCCC AGCTCGAAGT GACCACCACC 
CACGGTACGA TCAACCTCCC GGGCGACTAC TCTGGAAAAT GGTTTGTCCT TTTCAGCCAC
CCGGCCGACT ACACGCCTGT GTGCACCACC GAATTTGTCG CCTTCCAGCA GCGCAGCCAG
GAATTCAAGG ACATCGGCTG CGAACTCATC GGCCTGTCCA TTGACCAGGT TTTCTCGCAC
ATCAAGTGGA TCGACTGGAT CAAGGAAACC TTTGACGTGG ACATCGAATT TCCGGTCATT
GCCGACGACA TGGGCAAGGT TGCTGCCCAG TTGGGCATGG TCCATCCCGG CAAAGGAACC
AATACGGTCC GTGCCGTCTT CATCGTCGAT CCGCAGGGAG CGCTACGGAC CATGCTCTAC
TACCCCCAGG AAGTGGGACG GAACATGGAC GAGATTCTGC GGACCGTGAA GGCCCTGCAG
ATGTCGGACA CCAACGGCGT GGCCTGCCCC GCCGGCTGGC CGAACAACGA GATCCTCGGC
GATCGGGTCA TCATTCCCCC GGCCACCGAC CACAAAACAG CCAAAGAGCG CAAAGCGCAA
TCCGATTGTT ACGATTGGTG GTTCTGCCAC AAAATCGTGT AA
 
Protein sequence
MENRIPLLGE KMPQLEVTTT HGTINLPGDY SGKWFVLFSH PADYTPVCTT EFVAFQQRSQ 
EFKDIGCELI GLSIDQVFSH IKWIDWIKET FDVDIEFPVI ADDMGKVAAQ LGMVHPGKGT
NTVRAVFIVD PQGALRTMLY YPQEVGRNMD EILRTVKALQ MSDTNGVACP AGWPNNEILG
DRVIIPPATD HKTAKERKAQ SDCYDWWFCH KIV