| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2391 |
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| Symbol | |
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| ID | 8420251 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2735314 |
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| End bp | 2737035 |
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| Gene Length | 1722 bp |
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| Protein Length | 573 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645038992 |
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| Product | PAS/PAC sensor signal transduction histidine kinase |
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| Protein accession | YP_003199251 |
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| Protein GI | 258406509 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000390402 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGATAC TCAATCGCTT CTCCTGGAAA CAGACGGTCT TGTTTTCCAT TGTCGTCCTT
ATCGTCCTCG GCCTGAGCCT GAGTATCCTC ACCTGGCAGA ACCTCCGCCA ACAACGCCAA
GCCATCGACC GCCACGTTGC GCTGGCCGCC CGGTCCATCG CTCGCGGTGT CCAGGCCAAT
CTTTTCCGCG GCATGCGCAC CATGCGCATG CACCAAATGC GGGGCAACTC CCAGGAACTC
CCGACCTTGC GCCCCGCGGC GGACATGCTT TTGCAGGACT TGGTCCAAAA CGGCGACCTT
GTTTTCCTCC AACTCCGGAA CCCGGACGGC AGCGTCGCCC TGACCTCGCC CATGTCCCAA
ACCGTGGATA TCCCGGCGGG CGCCCGCCAG GCCATTCGCC AGGGCCGGAC CTGGAACGCC
CAGATCGACT GGCGGAGCAA ACGGACACTG CTTTTCCTGG CCCCGACGCG CCCCCATCTG
GCCCCCTTGT GCTCCGAAGG CCAGAGTGCC CAGTGTTCCC CGCAGACCCC CCCGTTTCTC
GTTCTCGGCC TGGACATGGA AGACCACTTG GCCCTGTATT CGCGCTACCG CCGCAACGCC
GTTCTCCAAT CCGGCTATGT GCTCGTGGTT GCCCTGGCCC TGTGGGGACT GGCTCTGGCC
TATCTCCGCC GGCGACAACA GGGACGACGC GTCGATGTTC TGGAAACCTT CCAGACCGCC
CTGCTCGACA CCATGCCCGA AGCCCTCTTG ACCCTGGATG CCAAGGGCCG CATCCAAAGC
GTCAACCGCG GAGCCACCCA ATTATTCGCC AGTCCGGCCG CGGCGATTGT CGGCAAGCCG
TGGCGCGAGG CCTTGCCCCT TTTTGGCGCT GCCGAGGCAC CGGACACCGA ATTGCCTCGC
AAATGGACCA AAGTCCATTT CGGGACCAAG GAGGTTGAAG CCGTTAGCGT GCCCCTGGAG
GCGCCGGATG CGGACGCTGC CACGCTGCTG TTGCTTCGCG ACCGCACTGA ACTGGCCGAG
CTTGAAAAGG ATCTCGAAGA AACCCGGAAG CTGGCGACCA TCGGCCGTCT CGCTGCGGGC
CTGGCCCATG AGATCCGCAA TCCCTTGAGC GCCCTGAGAG GGTTCGCTCA ATATTTCGCT
GGAAAATTCG CACCTGAGGA ACAGGCCCAT ACCTACGCCC AGACCATGGT CCGCGAAGCC
GACAGGCTGA ACCGGGTGGT CACCGATCTG CTCTACATGG CCCGTCCCCA GCCGCCGCAT
CCCCAGTCCC TCTCTTTACG GGCCCTGGCA GAAGATCTCG AACGCCTCCT GGGATTCGAT
CTCAAACAGC ACAGCACCAC CTTTGCCCTG GATCTGGAAA CGGACCATGT CTGGGCCGAT
GAGGAGGGGC TGCGCCGCAT TCTGCTCAAT CTGCTGCTCA ACAGTTTAAG CGCTCTCCCG
GAAGCCGGGG GACACATTAC CCTTGCGACG CAGTCCTCCG GGACCGGTAT CTGGATCCTG
GTTCGCGACA CCGGACAGGG CATGGACGAA GCGACCAGGG AACAGGCTTT GGAGCCGTTT
TTCACCACCA AAGACCGGGG AACCGGCCTC GGCCTGGCCC TGGTCCACCG CATTGTCCGC
GACCACGGCG GCAGCCTGGA AATCCGGACT GCTCCTGACG CGGGCACTGA AGTGGCCCTG
TTTTTTCCCG GCCCCGACCG CGCCCCAACC GAAGCGCAAT AG
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| Protein sequence | MQILNRFSWK QTVLFSIVVL IVLGLSLSIL TWQNLRQQRQ AIDRHVALAA RSIARGVQAN
LFRGMRTMRM HQMRGNSQEL PTLRPAADML LQDLVQNGDL VFLQLRNPDG SVALTSPMSQ
TVDIPAGARQ AIRQGRTWNA QIDWRSKRTL LFLAPTRPHL APLCSEGQSA QCSPQTPPFL
VLGLDMEDHL ALYSRYRRNA VLQSGYVLVV ALALWGLALA YLRRRQQGRR VDVLETFQTA
LLDTMPEALL TLDAKGRIQS VNRGATQLFA SPAAAIVGKP WREALPLFGA AEAPDTELPR
KWTKVHFGTK EVEAVSVPLE APDADAATLL LLRDRTELAE LEKDLEETRK LATIGRLAAG
LAHEIRNPLS ALRGFAQYFA GKFAPEEQAH TYAQTMVREA DRLNRVVTDL LYMARPQPPH
PQSLSLRALA EDLERLLGFD LKQHSTTFAL DLETDHVWAD EEGLRRILLN LLLNSLSALP
EAGGHITLAT QSSGTGIWIL VRDTGQGMDE ATREQALEPF FTTKDRGTGL GLALVHRIVR
DHGGSLEIRT APDAGTEVAL FFPGPDRAPT EAQ
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