Gene Dret_2384 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2384 
Symbol 
ID8420244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2726822 
End bp2727379 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content55% 
IMG OID645038985 
ProductNapC/NirT cytochrome c domain protein 
Protein accessionYP_003199244 
Protein GI258406502 
COG category[C] Energy production and conversion 
COG ID[COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACGCC TGTTCAAACC GGCCCTGTTT GTAGCGCTCG GCCTGGTCCT GGCGTTTCCG 
CTTTTCAGCA TGGCCTATTA TACAATGGTC AGGACCTCGA CGCCGCAGTT CTGCGCCTCC
TGCCATGAGA TCGAATACGC CTACAACACC TGGAAGACGT CGACCCATGC CAACAATCCC
AAGGGGTTTG TGGCCGATTG CATGGATTGT CACCTTCCAG CCCCCCACGA CACGTTCGAT
TTTTTCTACG CCAAGACCTA CCACGGTATT AAGGACGTGG TGAAACACTT CACCATGGAT
ACCTCCAAAT ACGATCACGA GAAGAACCGG GAACGGGCCT ATGAGGACAT CGATAACGCC
CAATGCCAGA AATGCCACCG GAATCTTCTC GAGATGCCCT ATAAGCGCGG GGCGATGCTG
GCCCACAAAG CGGTGCTCTA TCCCCGGCCG GGGTATGAAA AAAAATGCGT CGATTGTCAC
GACGATCTGG TCCATTTTCC GAAGGACAAT TACGCCTATG ACCCGGAAGT CCAGGACCGG
AACAGCGGTT CGTTGTGA
 
Protein sequence
MRRLFKPALF VALGLVLAFP LFSMAYYTMV RTSTPQFCAS CHEIEYAYNT WKTSTHANNP 
KGFVADCMDC HLPAPHDTFD FFYAKTYHGI KDVVKHFTMD TSKYDHEKNR ERAYEDIDNA
QCQKCHRNLL EMPYKRGAML AHKAVLYPRP GYEKKCVDCH DDLVHFPKDN YAYDPEVQDR
NSGSL