| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2380 |
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| Symbol | |
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| ID | 8420240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2722317 |
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| End bp | 2723762 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645038981 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT family |
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| Protein accession | YP_003199240 |
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| Protein GI | 258406498 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGGT GTCTATTTCT GGTTGGTGTC GCAAGCATTG TTTTGACCGG CTGTATGCCG
TTTCATCCTC CTGCGCGCAA TTCCACTGCG CCGGTGCCCA TGCCCGAGAC CTTTGACAGC
GAGGCGCAAG AGCAGGCTGT ACCGGCGCCG TGGTGGAAAG CCCTGGACAG TCCTGAGCTC
AATCGTCTGG TCCAAACCGC TCTGGAACAC AATTTCAGCA TCCGTTCGGC CTGGGCTCGT
CTGCGCCAGG CCCGGGCCCA ACTGGACCGG GCCGAGGCAA GCCTGTGGCC CAGCCTTGAG
GGCTCGGGCA CGGGGGAGCG GACCCGGTCC TACCGGGAAC AGACGGATAT GACCACTTCC
GCGAACGAGA TGTCCTACGG GGTGAGCGCT TCCTACGAAC TCGATCTCTG GGGCCGGGCG
CGCTCGGCGC GGCAGGCCCA GGTCCTGAGT TCCAGCGCCA GCCGGCAGGA TGTCGAAGCG
GCAGCAGCGA GTGTCGTGGG ACAGATTACG GCCACCTGGC TCGAGACGCT CTCGCTGCGT
GAGCAGGTCC TGCGCTTGCG CCGCCAGATC GCGGCCGAAA AAAAGGTCCT GCGCTTGCAG
CGCATCCGTT ATGAAAACGG GGCCATTGAC GGCCCGACCC TGACCCGACA ACGGCGGCAA
GTCGCGGCCA CCGAAGGCAG TCTGCCGGAT TTGCAGGCCC GGCTGGGCCG GGCGCGAAAC
GCCCTGGCCA CCCTTGTCGG CGTCTCGGGA CCTGACGCGC TCTGCCTGGA GCAGGAGCGG
TTTCCTGATC TGCTCCCCCT CCCTGAAGCC GGCCTTCCAG CCCGCCTTAT GGCCGAACGT
CCGGATATTC AGGCCGCCTG GCTCAAACTC CGGGCCGCGG ACTGGGAGGT GGCCGTGGCC
CAGGCGGACA TGCTCCCCAG TCTTTCCCTG TCCGCGGGCC GGACCTACAC CAACGACATG
TTCAGTCTGG ATTGGACGAG CTGGATCTCA CGATTGACCG GCAATCTGAC TGCGCCGCTG
TTTTCCGGCG GGCGCCGACT GGCCGAGGTC GAACGGACCC GGGCGGTGGT TGAGCAACGC
GTTGCCGATT ACGGCGAGGT CGTGTTGGAA GCATTTCAGG ATGTCCGTGA CGCACTGGTC
AACGAAGAGA CGCAGCGCAG GGCTGTGGCC CAGACCCGGC GGCAGCTGCA AGCCGCCCGT
CAGGCGCTGT CTCAGGCTCG CTTGCGGTAT GCCAACGGTC AGAGCGGCTA TGTGGATGTG
GTTGCCGAAC AGGCCAGCGT GGCCCAGTTC GAACGGCAGC TGGTCCAGCA ACGGGCACAA
CTCCTGACGG AGCGCGTCGG CGTCTACCGT GCCCTGGGCA ATGCCTGGAC CGATTCCCTG
AGCGCTTCCG GGAAAAGCGT CTCGAGAGCT GGTTTTCAGA AAGGACATAT GGAGCAAGAG
CAATGA
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| Protein sequence | MQRCLFLVGV ASIVLTGCMP FHPPARNSTA PVPMPETFDS EAQEQAVPAP WWKALDSPEL
NRLVQTALEH NFSIRSAWAR LRQARAQLDR AEASLWPSLE GSGTGERTRS YREQTDMTTS
ANEMSYGVSA SYELDLWGRA RSARQAQVLS SSASRQDVEA AAASVVGQIT ATWLETLSLR
EQVLRLRRQI AAEKKVLRLQ RIRYENGAID GPTLTRQRRQ VAATEGSLPD LQARLGRARN
ALATLVGVSG PDALCLEQER FPDLLPLPEA GLPARLMAER PDIQAAWLKL RAADWEVAVA
QADMLPSLSL SAGRTYTNDM FSLDWTSWIS RLTGNLTAPL FSGGRRLAEV ERTRAVVEQR
VADYGEVVLE AFQDVRDALV NEETQRRAVA QTRRQLQAAR QALSQARLRY ANGQSGYVDV
VAEQASVAQF ERQLVQQRAQ LLTERVGVYR ALGNAWTDSL SASGKSVSRA GFQKGHMEQE
Q
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