| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2379 |
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| Symbol | |
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| ID | 8420239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2721088 |
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| End bp | 2722320 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 645038980 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003199239 |
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| Protein GI | 258406497 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1566] Multidrug resistance efflux pump |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTT TCCCACGCCT GAAAGTGGTT TTTAAAGGAC TGGTGACGCT GGTGATTTTG
GCCGTGGGTG CTGCGGTGGC CCTGTATTTT GTCCAAAACC GCCCCCACGT CGAGCGGGGC
GAACGGCCCA CTCCTCCACC GGTGGTGGTG GAAACCATTC CCCTTCGGCC GACCACGGTC
CAAGCCTCGA TCACGGCCAT GGGGACGGTG CAGCCAGCGC AAAAGACCGT GGTCCGGGCC
CAGGTGGGCG GGACGGTCAC CGCGGTCCAT CCCCAATGGG GACCGGGAGG CCGTGTGACC
GAGGGCGAGA CCCTGGTGCG CATTGATCCT GCCGACTACA GGCTGGCCGT AAAGCGCAAG
GAAAGCGCTC TGGCCCAGGC CGAAGCGGAT CTGGCTCTGG AACAGGGACA GCAGGAGATC
GCCCGTCAGG AATGGGATAT GGCCCGCAGA GCGGACAATG CGACGCTGAA CAAGACTTCC
CTCGCCCTGC GAAAGCCCCA GCTCAAAAAG GCCCGGGCCC AGGTCCAAAG TGCCCAGGCT
GATCTGGAGC AGGCCCGGCT GGATTTGCGC CGGACCACCG TCACGGCCCC CTATGACGGC
CTCATCCTCG AGCGCCATGT CGACCGCGGC ACTGCGGTTT CCGCCCAGGG GCAATTGGCG
ACACTGGTCG GAACCGGGAG CTATTGGATC GCGGCCCAGG TCCCCGTGGA CCGGCTGGTG
GCCATGTGTA TTCCGCCGGG ACAGGCCGCG GGAACAGAGG TCACGGTCCG CTCCCAGACC
GGCAGTGCGA CCTGGGAGGG CCGGGTCCTG CGCTGTACGG GCAGTCTCAG CGGCCAGGCC
CGGATGGCGG AGATCCTGAT TTCCGTCTCC GATCCGCTGG GTATCGAGAC CACCCAGGAA
GCGGGGCTGC TTCTGGGGGA TTATGTGGAG GTGGTCATCA CCGGGCGGAG CTTTGAAGAG
GTGGCCCGGG TGCCGCGGTC GGCCCTGCAT CAGGGCAATC AGATCTGGCT TTACCGGCAG
GGCCGTTTGC GGGTCAAACC TGTTGAAGTG CTCTGGAAGA GCGCCACGGA TGTGATCGTG
CCCTTCGACT TTGCAGAGGG CAGCCGCCTG ATCGTTTCGG ATCTGACGAC ACCGGTGGAG
GGCATGAGCC TGCGCCGGGC GGGTCTTCTC GGAGAGGGCG AGGCCGCCAA CGCCACGCAG
ACCAGAGCTG AGAACGCCGG AGGCGATTCA TGA
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| Protein sequence | MSRFPRLKVV FKGLVTLVIL AVGAAVALYF VQNRPHVERG ERPTPPPVVV ETIPLRPTTV
QASITAMGTV QPAQKTVVRA QVGGTVTAVH PQWGPGGRVT EGETLVRIDP ADYRLAVKRK
ESALAQAEAD LALEQGQQEI ARQEWDMARR ADNATLNKTS LALRKPQLKK ARAQVQSAQA
DLEQARLDLR RTTVTAPYDG LILERHVDRG TAVSAQGQLA TLVGTGSYWI AAQVPVDRLV
AMCIPPGQAA GTEVTVRSQT GSATWEGRVL RCTGSLSGQA RMAEILISVS DPLGIETTQE
AGLLLGDYVE VVITGRSFEE VARVPRSALH QGNQIWLYRQ GRLRVKPVEV LWKSATDVIV
PFDFAEGSRL IVSDLTTPVE GMSLRRAGLL GEGEAANATQ TRAENAGGDS
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