Gene Dret_2365 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2365 
Symbol 
ID8420225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2700179 
End bp2701000 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content63% 
IMG OID645038967 
Productnitroreductase 
Protein accessionYP_003199226 
Protein GI258406484 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAATT TCCGTATCGA CGAAGACCGC TGCATCCAAT GTGGCGAATG CGCCGCCGAC 
TGCCCGGCCA TGTGCATCAG CCTCGACAAC GGGCTGCCCG AAATTCACGA AAAACGGTGC
ATCCGCTGTC AGCACTGCCT GGCCGTCTGC CCCACGGCAG CCCTGTCCAT CCTGGACAAA
GATCCAGACG ACAGCCGGCC GCTGCACAAA GACAGCCTGC CTGCTCCCGA AAAGATGGAG
ACTTTGCTCA TGGGCCGCCG CAGCGTCCGG CGCTACAAGC CCGACCCGGT TCCCAAAGAA
ACCATCCGGC ACCTCCTGCA GATTACCGGG CACGCCCCAA CCGGCATGAA TGTACGCCAG
ACCTTGTACA CCGTGGTCGA CGACCCCGAG GTCATGAACG AGGTCCGTGC GGCCACCTTA
CGCCGGGTGA AAGAGGTCAT CGAAGATCCG GGGCTGCCCA AAGGGCTTGA AATCGTGGGC
AAGTATGTCG CTGCCGGGGA CAAGATGGGC GTGGACATCT TCTACCGCGG TGCGCCGCAT
CTGCTGATCG TCTCCAGTCC GCACAACGGC CCCTCTCCGG ACGCGGACTG CCTCATCGCC
TTGTCCCAGT TCGAACTTCT CGCTGCGACA ATGGGGCTCG GCACGGTCTG GGACGGCCTG
GCCAAATGGG CCATTGCCCG CATCGCCCCA GATCTGCGGG AGCGCCTCGG CATCCCAGAA
GACCACACCA TCGGCTACGC TATGGCCTTC GGGTATCCGG CAGTGACCTA TTACCGCACA
ACCCAGCACG ACGCACCGGC CATCAACGTT GTCGGCTCGT AG
 
Protein sequence
MLNFRIDEDR CIQCGECAAD CPAMCISLDN GLPEIHEKRC IRCQHCLAVC PTAALSILDK 
DPDDSRPLHK DSLPAPEKME TLLMGRRSVR RYKPDPVPKE TIRHLLQITG HAPTGMNVRQ
TLYTVVDDPE VMNEVRAATL RRVKEVIEDP GLPKGLEIVG KYVAAGDKMG VDIFYRGAPH
LLIVSSPHNG PSPDADCLIA LSQFELLAAT MGLGTVWDGL AKWAIARIAP DLRERLGIPE
DHTIGYAMAF GYPAVTYYRT TQHDAPAINV VGS