Gene Dret_2362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2362 
Symbol 
ID8420222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2696487 
End bp2697881 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content56% 
IMG OID645038964 
ProductATPase 
Protein accessionYP_003199223 
Protein GI258406481 
COG category[R] General function prediction only 
COG ID[COG1672] Predicted ATPase (AAA+ superfamily) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTT TTGTAGATAG ACAACAAGAA TTGCGTTTCC TTGAAGGGGA ATTCGCCCAG 
GACCGGGCCT CCCTTGTCGT TTTATACGGC CGGCGCCGGA TCGGAAAAAC CACGCTTATC
CAACATTTTA TTCAGGACAA ACCGGCCCTG TACTTCGTGG CTACCGAGGA ATCGGAACGC
GAAAACCGGC GCAATTTCCA GCAGGCCGTC GCGGCCGCCA CCGAAAACTG GTTTTTGCAA
AAGGATATCC TTTTGGACTG GGAGGAGATT TTCGCCGTCC TGGTCGAGCA CCAGCCCAAC
ACCCGCATGG TCATCGCCCT CGACGAGTTC CAATACTTGG GCAAAACCCA AAGCGCCTTC
CCGTCTGTAT TGCAAAAAAT CTGGGACCAG ATGCTGGCGC AGGCCAATGT CATGGTCATC
CTGTGCGGCT CGCTCGTGGG GATGATGGTC GAGCAGACCT TGGCCTACTC CAGCCCGTTA
TACGGTCGAC GTACCGGGCA AATCCGCCTC GGCCCGATTG CCTATTCGGA ATACACCGCC
TTTTTCCCTC CTTCGACCAC GATCAACCGC ATAGAACATT ATGCCGTCAC CGGCGGGGCC
CCCAAATATG TTGAGCTGTT CCCGCCGACA CCAGACATCT TCCAGGCCAT AGAAAACACT
ATCCTTTCCA AGCAAAGTTT TCTGTACGAA GAACCGCTCT TTCTCCTGGA CAAAGAATTC
GGGGAGCCAG GGACCTATTT TTCCTTGCTC AAAACCATCG CCGCCGGCCA TCGCAAATTG
GGCAAGATCG CCTCCGCTCT GGGGCTCGGC CAGTCCAATC TGACCCGCTA TCTCAAAACG
CTCCAGGATC TGGACCTGAT CGCCAGAGAC GTCCCGGTAA CCGAAACCCA GCCCCAGAAA
AGCAAAAAAG GGCTCTACCG GATCACAGAC CATTTCCTCG CCTTCTGGTT TTGTTTCGTG
CATCCGTTTC GCAATTCCCT GGAAATTGAA AACCCCGCCC CTGCACTACG CTTTCTACGG
GAACAATTCC GGCCCAGCCA TGTGAGCTTT GTTTACGAGG ATATCTGCCG ACAATGGCTT
TTGCGCCACG GCCTGAACAA AGCCCCAGAC ATGTCTCTGC TCCACGCCGG GCGCTGGTGG
GACAAAAACG CGGAAATCGA TATTGTCGGC TTGAGCGAGG ATCCCGCCGA GGTGGTCGTC
GGGGAATGCA AATACATCTC ACGCCCAGTG GGAACGGAGA TCTATCTGCA ACTGACGCGC
AAAGCCCAGC TCCTGCCGAC GCCCCCAAAG GCTACCCTCC AGTATGTGCT CTTCAGCCAA
TCCGGATTCA CCCCGGCGCT TCGCGACCTG GCCCGCGAAG ATCCCACCCT GCATCTGGAA
ACCATCAGCG CCTAG
 
Protein sequence
MTAFVDRQQE LRFLEGEFAQ DRASLVVLYG RRRIGKTTLI QHFIQDKPAL YFVATEESER 
ENRRNFQQAV AAATENWFLQ KDILLDWEEI FAVLVEHQPN TRMVIALDEF QYLGKTQSAF
PSVLQKIWDQ MLAQANVMVI LCGSLVGMMV EQTLAYSSPL YGRRTGQIRL GPIAYSEYTA
FFPPSTTINR IEHYAVTGGA PKYVELFPPT PDIFQAIENT ILSKQSFLYE EPLFLLDKEF
GEPGTYFSLL KTIAAGHRKL GKIASALGLG QSNLTRYLKT LQDLDLIARD VPVTETQPQK
SKKGLYRITD HFLAFWFCFV HPFRNSLEIE NPAPALRFLR EQFRPSHVSF VYEDICRQWL
LRHGLNKAPD MSLLHAGRWW DKNAEIDIVG LSEDPAEVVV GECKYISRPV GTEIYLQLTR
KAQLLPTPPK ATLQYVLFSQ SGFTPALRDL AREDPTLHLE TISA