| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2361 |
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| Symbol | |
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| ID | 8420221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2694285 |
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| End bp | 2695637 |
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| Gene Length | 1353 bp |
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| Protein Length | 450 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 645038963 |
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| Product | PAS modulated sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003199222 |
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| Protein GI | 258406480 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGGGAC GAATACCAGC TGTGCACCAC AATATTGTTC TGGACTCGAT TAACGAGGGC
GTGTTCACGG TTGATTTGAA CTGGACCCTT CAAGGACTGA ATGCGGCTGC GGAAAAAATC
ACCGGCAGAA CCCGGGAATG GGCCCGGGGC CGGAAATGCT TTGACCTCTT TCAAAGCCGG
CTGTGCGGGG AGGACTGTCC AATCAGGCAA ACCCTGACCA CTGGAGAACC GGTAGTTAAC
CGCAGGACAT ATATACTCAA CGCCAAAGAG GAGTGCGTCC CGGTGCGCAT TTCCACGGCT
GTATTGCACG ATGCAGAGGG GAGGACCATC GGCGGGGTGG AAACCTTTCA AGATCTGTCC
GAGGTCGAAA AGTTATGCAG AGAGCTCAAA TCTCACTATA CATTCGATGA TATTGTCGGC
CGTAGCCCGG CCATGCAACA TATATTCGAG ACGTTGCCTT TGGTCGCCAA AAGTGACAGC
ACAGTGCTCA TAGAGGGAGA AAGCGGCACG GGAAAGGAGC TTTTCGCCCG GACTCTCCAC
AACCGCTCCC GCAGGTGTCG GGGGCAATTC GTCCCGGTCA ATTGTGCCGC TCTTCCGGAT
ACGTTGCTTG AGTCTGAGTT TTTCGGATAT GAACCCGGGG CCTTTACCGA TGCCAAACGT
TCCAGGTCAG GCAGATTTGA ATTGGCCCAC TGTGGGTCCA TCTTCCTGGA TGAAATCGGG
GACATCTCCC AGGCATTGCA GGTGAGGCTT TTGCGGGTGC TCCAGGAGCG GTCAGTAGAG
CCGCTTGGCA GTGAAAAGAG TAGAAATATT GATGTCCGGG TGATCGTGGC CACCAACCAG
AATCTGAAAA ACCTGGTTGA ACAGGGGCTA TTCAGAAGGG ACCTTTATTA CCGCATTCGG
GTGATCAAGC TGAGAATTCC GCCCCTGCGC GAGAGGCGAG ACGACATTCC GTTATTGATC
GACCACTTCA TCAACAAATT CAACCAGCTT CAGGACAAGG ATATCGCCGG AGTCACCGAT
TCAGTCATGA ACAGACTGAC CGAATACGAC TATCCGGGAA ATGTCCGGGA GTTGGAAAAC
ATTGTGGAAC GCGCTTTTGT CTTTTGCCAG GGGGCATTGA TAGAAATGCG CCATCTCCCC
AGCGAACTGC GGGACACCCA ATCCAGAAAC TTGCTGGGCG ATAAACAGGG CTTGACGTTG
AAGGAAATGG AGAGGGCTCT CATCACCAGA GCGTTGCAAA TCAACAAAGG GCACAGGAAA
AATTCCGCCA GGACACTCGG AATCAATCCG AGCACCCTGT ACAGAAAGAT GAAAGCCCTG
GAAATAGACT CTTTTGCTTA CTGGCAGGAT TAG
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| Protein sequence | MAGRIPAVHH NIVLDSINEG VFTVDLNWTL QGLNAAAEKI TGRTREWARG RKCFDLFQSR
LCGEDCPIRQ TLTTGEPVVN RRTYILNAKE ECVPVRISTA VLHDAEGRTI GGVETFQDLS
EVEKLCRELK SHYTFDDIVG RSPAMQHIFE TLPLVAKSDS TVLIEGESGT GKELFARTLH
NRSRRCRGQF VPVNCAALPD TLLESEFFGY EPGAFTDAKR SRSGRFELAH CGSIFLDEIG
DISQALQVRL LRVLQERSVE PLGSEKSRNI DVRVIVATNQ NLKNLVEQGL FRRDLYYRIR
VIKLRIPPLR ERRDDIPLLI DHFINKFNQL QDKDIAGVTD SVMNRLTEYD YPGNVRELEN
IVERAFVFCQ GALIEMRHLP SELRDTQSRN LLGDKQGLTL KEMERALITR ALQINKGHRK
NSARTLGINP STLYRKMKAL EIDSFAYWQD
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