| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2357 |
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| Symbol | |
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| ID | 8420217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2690407 |
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| End bp | 2691165 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645038959 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_003199218 |
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| Protein GI | 258406476 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGACG ACTCTCTTTT CGATCAAGAA ACGCAGGTCA TTCAGGAGGC CGAGGCGATT
GCGCGCGACA GCCGTCACGC CGACAACCCG CTTCTGCCCC CCTACACAGA ATTATTAAAC
GAATACAAAC GGCTCTTCCG GCATACACGG CGCCTGGTGC GCATGGGCGA CCGGATGCAG
AAAAATCTCA ACACATTAAA CGAAGAACTC AACGCGCATA AGGACGTTCT CTCGGAAATG
TCCTACATCG ACGGTCTGAC CGGCATCGCC AACCGCAGGC GGTTTAATGA AACCGTGGAG
GCGGAGTGGC AGCGGGGCCT TCGCAACAAC CAGGCCCTGG CGCTGGTCTT TTTGGACCTC
GATTATTTCA AACAGTACAA TGACAATTAC GGGCACAATC TGGGAGATAC CTGTCTTATT
GATGTGGCCA AGGCGCTCCA GCAATCCGCC AAACGGTGTA ACGACCTTGT CGCCCGCTAT
GGCGGAGAAG AGTTCGTGAT TTTGTTACCC GACACGGACC AGGAGGGGGC CTTTGCAGTG
GGCCAAAAGG TGCTCGACAA CATCAGAAAC CTCGAGATTC CGCACGCCTT CTCACCAATT
GCGCAGGTGG TCACTGCCAG TGTGGGGGTG GCGGTGACAA TCCCCGGCGC GGAGCGCACG
CCGCAGGATC TGATCCAAAC CGCGGATGCC CAACTGTATG CGGCCAAAGA GGCTGGACGA
AACCAAATGC AAGGAAGGGT TCTTGACCAT GATGCATGA
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| Protein sequence | MSDDSLFDQE TQVIQEAEAI ARDSRHADNP LLPPYTELLN EYKRLFRHTR RLVRMGDRMQ
KNLNTLNEEL NAHKDVLSEM SYIDGLTGIA NRRRFNETVE AEWQRGLRNN QALALVFLDL
DYFKQYNDNY GHNLGDTCLI DVAKALQQSA KRCNDLVARY GGEEFVILLP DTDQEGAFAV
GQKVLDNIRN LEIPHAFSPI AQVVTASVGV AVTIPGAERT PQDLIQTADA QLYAAKEAGR
NQMQGRVLDH DA
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