| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2356 |
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| Symbol | |
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| ID | 8420216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2688186 |
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| End bp | 2690225 |
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| Gene Length | 2040 bp |
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| Protein Length | 679 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038958 |
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| Product | protein serine/threonine phosphatase |
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| Protein accession | YP_003199217 |
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| Protein GI | 258406475 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGGAT TGGACAAAAA GTTGCGGACC AAATCCCTGC TGGCCTTGGG TGTGGCCTGC
CTCATCGCCT TGGGGCCGTC CTTGTGGATC GGCTGGGAAA TGGTCGAGCG GGGACGGGAG
CATTTCGGCC AAGCATACGC GGTCAATTTC ACCCTGCTTA ACGCCCAACG CATCGAAAAC
CCGGTTACCA AAGAGATCGC CCTGGCCAAG CGGTTCGCGG ATTCGGTCCT GCTGCGCCAA
TGGCTCCACA CCCCGAACGC CACCCGGGCG AATGCGCTTT TCTTTGAGGA AGCCAAAGGG
TTTCGCGAAG ATTTTCGCGG CGAGAACTAC TTCGTCATCA ATGATGAAAC CCTTGCCTAC
TACTATAATG GCGAGGACAA ATCCTACAGC GAATCCCCCC GTTACCATCT GCAACCCAAA
AGCAGCGATG ATCTCTGGTA TTTCAATACC ATGAAGACGG TGAACTCCAC GATTCTCAAC
GTCAACGTGG ACACCCATCT CCAGAAAACC CAGGTCTGGA TCGATGCCAT CGTCTGGGAC
CAGGACCGCA AAATCGGCAT GGCCGGCACC GGCATGGAAT TGACTGGTTT CTTGAAAGAT
TTTTTGAGCC CGGACGAACC GGGTGTGACG CCGATGATTG TCGATGAACG CGGCGTGGTC
CAGGCCCATC CCAATCCGGA CCTCATCTCC CTGGGTTCCG CAGCCAACGC CAGCAAAACA
AACATCAAGC TCCAGGCACT GCTCGCCAAT GGCGGCGACG CGCTCAACCG GGCGATGGAC
AACGCCCGCA GCGACCCCGG CAGTGTGCAG ACCTTGTGGG CCGAATTGGA CAACACGCGG
CAGCTTGTGG CCCTGACCTG GCTGCCGGAA CTTGAATGGC ACGTGGTCAG CGCCGTGGAC
CTGCACGCCG CGCAAGTGCT GAGCACGCAG TGGGTGGCGG CCGGGATTGC CGGTGTGGCC
GGGCTTTTCG GGGCCATGCT CCTTGTCTTC GGCTACGGCA TGGACAAGCT TGTCCTCCGT
CCCTTGAACA AACTCCACCA CTCGGCCACC GTGCTGGCCG AAGGGGACTA CGATGTTTCC
CTGCCGCCGG CCACCGGTGA CGAAATCGGG GACCTGACCC GCGCCTTCGG GGTCATGATC
GAACAGGTCA AAAGCCACAC CAGGGAATTG GAAGCCCGGG TCCGGGAGCG CACCAGCGAA
CTCAAAGAAA AATCGGTTTT GCTGGAACGG GCCAAGGAGC AGGCGGAAAG CGCCCATGCA
GCCAAGGCTC AAGCCCTGCA CAACATTCTT GAGAGCATCC AATACGCCCA GACCATTCAG
CAGGCCAGCT TGACCACCGA GGAGCAACTC CGAGGCCTTG TCAGCGACTG CTTCACCATC
TGGCAGCCCA AGGACGTCAT CAGCGGCGAC ATCATCTGGA GCAAAACCTT TGATGACGGT
TTCGCCCTCG CCGTGGCCGA CTGCACCGGA CACGGTGTCC CCGGGGGGAT CATGACCATG
GCCGCTGTCT CGGCCCTGGA CCGTGTCGTC AGCCCAAGCG GAGTCGCCGA TTCGCAGAGG
GTCTTGCAGG GGGTGAGCCG GGTGGTTCAG GAAATGCTGG CCAATCACGC CACAGAACGT
TCCTCTGAAG ACGGGTTGGA CATGGGCCTG TGCGTCTATT CGCGTTCGAC GCAAACCCTG
TATTTCACCG GCAGCCGAAT CAGCCTCTTT TATGACGACG GTGACGGCAT TCGGGAGGTC
AAGGGCGACC GAGAGAGTTT GGGGTACCCC TCCTCGGACC CGATGTATCC CTTTCAGACC
CACGCGATGA AAGCGCTCCC TGCGACACGG TTCTATCTGA CAACCGACGG GCTTATCGAC
CAAGTGGGTG AAGAAACAGG GCTCCCCTTG GGCAAACGCC GCTTGACAGC GCAATTACAG
CGCATGGAAG GGCTTTCCTT TGTCGAACAG CGCCAAGCCG TGCTGGACAT GCTCGCCGCC
TTCCAGGGCG GGGAATGCCA GCGCGATGAC ATCACCGTGG TGGGCTTTCA GCTCAGTTGA
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| Protein sequence | MLGLDKKLRT KSLLALGVAC LIALGPSLWI GWEMVERGRE HFGQAYAVNF TLLNAQRIEN
PVTKEIALAK RFADSVLLRQ WLHTPNATRA NALFFEEAKG FREDFRGENY FVINDETLAY
YYNGEDKSYS ESPRYHLQPK SSDDLWYFNT MKTVNSTILN VNVDTHLQKT QVWIDAIVWD
QDRKIGMAGT GMELTGFLKD FLSPDEPGVT PMIVDERGVV QAHPNPDLIS LGSAANASKT
NIKLQALLAN GGDALNRAMD NARSDPGSVQ TLWAELDNTR QLVALTWLPE LEWHVVSAVD
LHAAQVLSTQ WVAAGIAGVA GLFGAMLLVF GYGMDKLVLR PLNKLHHSAT VLAEGDYDVS
LPPATGDEIG DLTRAFGVMI EQVKSHTREL EARVRERTSE LKEKSVLLER AKEQAESAHA
AKAQALHNIL ESIQYAQTIQ QASLTTEEQL RGLVSDCFTI WQPKDVISGD IIWSKTFDDG
FALAVADCTG HGVPGGIMTM AAVSALDRVV SPSGVADSQR VLQGVSRVVQ EMLANHATER
SSEDGLDMGL CVYSRSTQTL YFTGSRISLF YDDGDGIREV KGDRESLGYP SSDPMYPFQT
HAMKALPATR FYLTTDGLID QVGEETGLPL GKRRLTAQLQ RMEGLSFVEQ RQAVLDMLAA
FQGGECQRDD ITVVGFQLS
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