| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2338 |
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| Symbol | |
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| ID | 8420198 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2658973 |
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| End bp | 2660094 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645038940 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003199199 |
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| Protein GI | 258406457 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACCG CTATCGCTAT TGCTTTACTC GCCAGCCTCC TCTTGCCGGC CACAGGCTTC
ACCCAGCCCC AGGGGAAGAA CGCTCCGCCG CCGATGGTCA AAGTCACTCC GGTCCAGCTA
CGCAACGCCA ATACACCCAA CAGGTATGTT GGCCATGTCG AGGCACGAAC ATCCGTCAGT
CTCCGGGCCC GCGTCGACGG CTACCTGGCC CAAGTCAACT TCAAGGAAGG CGCCTACGTC
GAAAAAGGGC AGCTTTTATA TACAATCGAA CAGGGTCCCT ACCAGGCCCG CGTCGATTCT
GCCCAAGCCA AGGTGGCCCA GGCCGAAGCC GATGTGTTCA AATCCCAAAC CCGCCTGAAA
CGCCTCCAGG CCGCTCAGAG CCAGAGCGTG CCGCAAACCG ACATGGACGA CGCCAAGGCC
GCAGTGGACA TGGCCAAGGC GCGGCTTCAG GAAGCCAAGG CCAATCTCCA GACCGTTCGC
ATAAACCTGA ACTACACCAC CATTGAAGCT CCTATAAGCG GGAGGGTCGG GAAAAGTTTT
TTTAAAGAAG GCGACCTCGT CGCCCCCTCC TCGGGTCCCC TGGCCGAAGT CGTCAGCATG
GACCCCATCC GGGTGCAATT TTCCGTCAAC GAGCGCGAAG TCGGGGCTCT GCATCAGGCC
GTGAAATCCA CCGGCGACAA AACGAAAACC GGCACAGCGC CGTTGCGCCT GCAGTTCACG
GACAAGACCA CCTACCCCCA CAACGGCACA ATGGAATTCA TGGACAACAA AATGGACCCT
GACACCGGGA CCATTGCCGC CTGGGCCTCT TTCGCCAATC CCGAGGGCCG ACTCATTCCC
GGAGAATACG TCAATGTTGT GGTGCCTTCC GGCCCGCCGC AACAGCGCCC TTCGGTGCCC
CAGGTGGCAG TACAGCGTGA CGGCGACGGT GCCTTTGTCT TTGTCGTCGA TGCGAAGAAC
ACAGTCCGCA AGCGTCAGAT TACTATCGGA GAAAGTGTCG CTGACACGTT TATCGTCACT
TCCGGCCTCA GCACCGGTGA GCGCGTGGTG ACCGAGGGCA TCCAGAAAGT GGCTCCCGGG
AAGCGGGTTA CAATCCGCAA TGCGGAACAA AAGGACAATT AA
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| Protein sequence | MRTAIAIALL ASLLLPATGF TQPQGKNAPP PMVKVTPVQL RNANTPNRYV GHVEARTSVS
LRARVDGYLA QVNFKEGAYV EKGQLLYTIE QGPYQARVDS AQAKVAQAEA DVFKSQTRLK
RLQAAQSQSV PQTDMDDAKA AVDMAKARLQ EAKANLQTVR INLNYTTIEA PISGRVGKSF
FKEGDLVAPS SGPLAEVVSM DPIRVQFSVN EREVGALHQA VKSTGDKTKT GTAPLRLQFT
DKTTYPHNGT MEFMDNKMDP DTGTIAAWAS FANPEGRLIP GEYVNVVVPS GPPQQRPSVP
QVAVQRDGDG AFVFVVDAKN TVRKRQITIG ESVADTFIVT SGLSTGERVV TEGIQKVAPG
KRVTIRNAEQ KDN
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