| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2337 |
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| Symbol | |
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| ID | 8420197 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2657154 |
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| End bp | 2658719 |
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| Gene Length | 1566 bp |
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| Protein Length | 521 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038939 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003199198 |
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| Protein GI | 258406456 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATTTT CACACGAATC TTTTTTTCGG GAAGCGGTCC TGCGTATCTG CAGCAGCCTG
GACATCGACA AGGCCCTGGA GCGATGCCTG GAGTATGTCA AACAATTTAT CCCTGCTGAC
TCCATGCATT TATCGGTTTA TTTGCCGGAT GTGCAGATGT TGCAGTTTGT GGCTGTGGCT
GGTGAGGGGT ATGAAGTCAC CAATGCCGAT GCGATCTCAG TCCCGGCCAT TGATTGGGAG
GCGCCGGAAA ATCAGCGGCC GGGGATGCCT TTTGTCCATG TGGTCAACGA TCCCGCCAAC
GAACCGGAGG TGGAGACGGT TCTGCACCAA CTGAACCTCT CTTCTGATTT TTCGGTGATG
GTCATGCATC TGTATCTGGA TGGCAGTTCC ATCGGTGAAG TCGCTGTCCG GAGCCAGGGA
ACGCACAAGT ATACGGAGGA ACACGGTCGG CTGTTCGTCC TGCTCCGCGA GCCCCTGTCC
ATCGCGCTGG CCAATGCCTT GAAGCACAGG GAGGTTGTCC GGCTCAATGA ATTGTTGGCC
GACGACAGCC GGTATTTCCA GCAGGAACTG CGGGCCAAAC AAGGCCAAGA AGTGGTTGGG
GCGGAATTCG GATTGCGCGG GGTCATGGAG CAGGCGCAGC AAGTCGCGCA ATTGGACAAT
CCGGTGCTGT TGCTCGGGGA AACGGGCTGC GGCAAGGGGA TGATCGCCGA TACTATCCAC
AAACTTTCGC GCCGTGCTCA GGGGCCTATG ATCACGGTGA ATTGTGGAGC TATTCCTGCT
TCGTTACTGG AAAGTGAATT GTTCGGCCAT GAAAAAGGGG CGTTTACCGG GGCGGAACGG
CAGAAAAGAG GGCGGTTTGA ACGCGCCCAG GGCGGCACGG TCTTTTTGGA CGAAATCGGG
GAACTGCCTC TTGAATCCCA GGTCAAGTTG CTTCACGTGC TGCAACACAA GGAGATTGAA
CGTGTGGGAG GCAGCCAGAC CATTGCTTTG GATATCCGGA TCATTGCCGC CACGAATCGG
GACTTGGCGG GCATGGTCAG CAGCGGGCAG TTTCGGGAGG ATCTCTGGTA CCGTTTGAAT
GTCTTTCCGG TCATGGTGCC GCCGCTGCGG CAGCGCAAAG AAGATATTCC GGCCCTGGTC
CGGTACTTTT TGCAGCACAA AGCCGTGGAA TTGAAACTCC CGTCCCGTCC GAAACTCCCG
AGCGGAGCGC TGGACAAGCT CATGGCCTAC CATTGGCCCG GCAATGTCCG CGAGTTGGAG
AATTTTATTG AACGCGCCCT TATCCAAACC CCCGGGGGGG AATTGGAAAT CGATTCCCTT
TTGGACAATC TGCTCCAGAC GGATGGGACC AGGGGGAGTT GGGAACCGGA AGTCAACAGC
AACCAGCTCC CCTCACTGGA GACGGTATGC GCCGAACATA TCCGAAAGGC CCTCCGGCGG
GCAGGCGGCA AAATCAGTGG GCCCGGCGGA GCTGCGGAAA TGCTTGGGGT CCACCCGAAT
ACGCTCAGAC AGCGCATGGA CAAAATGGGC ATTGCGTATA AACGGCGTTT ACGAAACCGC
TTTTGA
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| Protein sequence | MPFSHESFFR EAVLRICSSL DIDKALERCL EYVKQFIPAD SMHLSVYLPD VQMLQFVAVA
GEGYEVTNAD AISVPAIDWE APENQRPGMP FVHVVNDPAN EPEVETVLHQ LNLSSDFSVM
VMHLYLDGSS IGEVAVRSQG THKYTEEHGR LFVLLREPLS IALANALKHR EVVRLNELLA
DDSRYFQQEL RAKQGQEVVG AEFGLRGVME QAQQVAQLDN PVLLLGETGC GKGMIADTIH
KLSRRAQGPM ITVNCGAIPA SLLESELFGH EKGAFTGAER QKRGRFERAQ GGTVFLDEIG
ELPLESQVKL LHVLQHKEIE RVGGSQTIAL DIRIIAATNR DLAGMVSSGQ FREDLWYRLN
VFPVMVPPLR QRKEDIPALV RYFLQHKAVE LKLPSRPKLP SGALDKLMAY HWPGNVRELE
NFIERALIQT PGGELEIDSL LDNLLQTDGT RGSWEPEVNS NQLPSLETVC AEHIRKALRR
AGGKISGPGG AAEMLGVHPN TLRQRMDKMG IAYKRRLRNR F
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