Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2334 |
Symbol | |
ID | 8420194 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2655816 |
End bp | 2656277 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 645038936 |
Product | thioesterase superfamily protein |
Protein accession | YP_003199195 |
Protein GI | 258406453 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1607] Acyl-CoA hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCCACTA CCCCGATTCA GCATCAGTAT GACCCGGATT TTTGTCATTG TTATGGTTGC GGACGTATGA ACGAGCACGG CCTGCAGCTC AAGAGCTATT GGTTGGGCGA GGAGGCGGTG GCCCGTTTTA CGCCAAAGGA CGAACATATG GCCTTGCCGG GCTTTGTTTA TGGCGGGCTT TTGGCCTCGC TGGTCGATTG CCACGGCGTC GGCACAGCGG CAGCCGTGGC GGCAACTGAA AAAGGGGGGT GCAAGGATGA ACCGTTGGGG CGGTATGTGA CCGCCGCCTT GCAGGTCACC TTTCGCAAGC CGACACCGCT GGGGCCGGAA CTCGTTCTTC GGGGGCGGCT CAAAGAGCGC CGCAAAAGCA AACTGGTGAT CGGTGTGGAG ATCGAAGCCG AAGGAGAAGT CACGGTCCGT GGCGAAGTAG TGGCAGCGCC GATGCCGGCA AGTATGGGGT AA
|
Protein sequence | MATTPIQHQY DPDFCHCYGC GRMNEHGLQL KSYWLGEEAV ARFTPKDEHM ALPGFVYGGL LASLVDCHGV GTAAAVAATE KGGCKDEPLG RYVTAALQVT FRKPTPLGPE LVLRGRLKER RKSKLVIGVE IEAEGEVTVR GEVVAAPMPA SMG
|
| |