| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2327 |
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| Symbol | |
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| ID | 8420187 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 2643739 |
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| End bp | 2645307 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 645038930 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_003199189 |
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| Protein GI | 258406447 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.860902 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATA ATGGTCACGA TAAAGCCACC CGAGTAACTC TTAATCCAAC CCGTAGATAC
GAAACACTCT TGCGAATTAA CAACGCTATA GTCCAGCAGA CAACCAGAGA GTCACTTTTT
CAGGCCCTTT CAAATGAGAT CTACCAACTC ATTGAATACG ACAGATTTAG CATTAACCTC
TATGACCACG AATTACGATC GCTTAGCTAC TTTGCTTCGG CTAAGGGTGT TTCCCTCGGC
GGGAAAATGA CACGCCCCCT CGAAAAAGGA TTGATCGCTC AAACAGTCAT TAGAACCAAA
GAACCTCTTA TTATACCTGA TGTTAAAAAC CAGTCATATT TCTCAAACAT GAATAATATG
ATTGAAGCAG GCCTCAACGT GACCATGGGA TATCCACTTA TTGTAAGAGA TACTGTTCTT
GGGTCTCTTC ATTTTTCTTT TAAGAATAGG CCCGACAACC TTGATGAGGT TAATAGTTTT
TTTGAAGATC TCTCACCTCA AGTCGCCATT GCTGTTTACA ACATACTAGC TCACAACAGG
CTAAAAAGAC TAAATGAAAG CTTAAAAAAT GAAAAAAAGT TTTTAAAGAA GGAGGCTCAT
GGATCTTTTG ATCCTGAAAA TTTCTTCTAC AAATCTGAAT CTATGTCAGA TGTAATGCAA
CAAGTTAAGA ATGTTGCAGC TTCTGATGCT CCTGTACTAA TTACGGGCGA AACAGGGACT
GGTAAAGAAT ATATAGCGCA CTGTATTCAC CATACATCAC TACGAAGTGA CGCATTGCTT
GTAAAAGTTA ATTGCCCTGC CTTAGCCTCG AGTCTTTTCG AAAGTGAGCT TTTTGGGCAC
ACTAAAGGAG CATTTACAGG TGCTTCGCAG CAAAGAATTG GCAGATTTGA AATGGCTAAC
AATGGAACAA TTTTTCTTGA TGAAATAGCT GAACTTCCAA TGCCGCAACA AGCAAAAATA
CTACATGTAC TTCAAGATAG GTGTTTTGAA AGAGTCGGTG AAAGTCGCTC AATCAGCGCC
GATTTCCGTA TTGTTGCAGC CACAAACAAA GATCTGCTAC ATGCTATTCA TAATGAATCC
TTTAGAAGCG ACCTGTACTA TAGATTAAAC ACAGCCCAGA TACACATACC TTCTCTAAGA
GAAAGACCTG AAGATATACC TGTTTTAGTT ATCAATCTTT CTGATCAAAT ATCTAAAAGA
TTGCACCGCC CCTCTCCAAA ATATTCTGAC AAAGTTTTAG AATCTCTTTG CCAATACCCA
TGGCCAGGCA ACGTCAGAGA GCTTAAAAAC TTTGTTCATA GAATGTTTTT ACAGAGATCA
GCTGAAAATG TTAAACTTAG TGACGTAAAA TCTTATCTAG GCAACTCACA GGAAATTGAG
TATAATGACA ACAATATCTT GCCCATGCAC GAAATGGAAA AACAACACAT TGTTAATGCA
CTACGAATTT GTAAAGGTGT TTTGTCTGGA GAAAATGGAG CTGCTTCTCT TTTACAAATG
AAAAGATCTA CTTTGCAATA TCGACTTAAA CGGCACAACA TAAACCCATC TGACTATAAA
GCTTTTTAA
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| Protein sequence | MTNNGHDKAT RVTLNPTRRY ETLLRINNAI VQQTTRESLF QALSNEIYQL IEYDRFSINL
YDHELRSLSY FASAKGVSLG GKMTRPLEKG LIAQTVIRTK EPLIIPDVKN QSYFSNMNNM
IEAGLNVTMG YPLIVRDTVL GSLHFSFKNR PDNLDEVNSF FEDLSPQVAI AVYNILAHNR
LKRLNESLKN EKKFLKKEAH GSFDPENFFY KSESMSDVMQ QVKNVAASDA PVLITGETGT
GKEYIAHCIH HTSLRSDALL VKVNCPALAS SLFESELFGH TKGAFTGASQ QRIGRFEMAN
NGTIFLDEIA ELPMPQQAKI LHVLQDRCFE RVGESRSISA DFRIVAATNK DLLHAIHNES
FRSDLYYRLN TAQIHIPSLR ERPEDIPVLV INLSDQISKR LHRPSPKYSD KVLESLCQYP
WPGNVRELKN FVHRMFLQRS AENVKLSDVK SYLGNSQEIE YNDNNILPMH EMEKQHIVNA
LRICKGVLSG ENGAASLLQM KRSTLQYRLK RHNINPSDYK AF
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