Gene Dret_2319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2319 
Symbol 
ID8420179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2634930 
End bp2636810 
Gene Length1881 bp 
Protein Length626 aa 
Translation table11 
GC content41% 
IMG OID645038922 
ProductAldehyde ferredoxin oxidoreductase 
Protein accessionYP_003199181 
Protein GI258406439 
COG category[C] Energy production and conversion 
COG ID[COG2414] Aldehyde:ferredoxin oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCTG GTTATACTGG TAAAATTCTT CATGTTGATT TAACTAGTTC TGAAACTTTC 
GTTGAAGAAC CAAGCGAGAA ATGGTACAAA ACCTATATGG GGGGTTCGGC TTTTGCCTCA
TATTATCTTT TAAAGATGCT CAAACCTGGT GTCGAACCTC TTAGTCCAGA AAATATTTTG
GTTTTTGCTA CAAGCGTTAT ATGTGGGGCT CCAATTTCCG GGTATAATCG CTATACAGTT
GCTTCTAAGT CTCCTTTAAC GAATTGTTTT GGGGAGTCAG AAGCCGGTGG GTATTTTGCA
CCAGAGCTTA AGTTTGCAGG ATATGATGCA ATTATTTGCA AGGGAAAAGC TCAATATCCT
GTATATCTTA GTATTGTCGA TGGGCATGTT GAGATTAAAG ATGCTCGCAA TGTTTGGGGG
TTGGATAACT ATCAGACATT GGAGATGATC AAGGAAGAAC TCGGCGATAA AAAAGTTCGA
GTTGCCAGTA TTGGTCCTGG TGGTGAAAAT CTTATTCGAT TTGCCAATAT TTCAAATGAC
ATAGAGCATT TCAATGGTCG CACTGGCATG GGCTGTGTTA TGGGCTCAAA AAACCTCAAG
GCAATTGCCG TTCGAGGTTC ACAAAAGCCT TCTTTCGCTG ACCCTGAGGC TGTCAAGGAA
ATTAATAAAT GGCATAGGAA TAGACTTAAA AACCACCCAC CAAATAAGGG ATTGTCGACT
GGCGGCACAT CTGTTTTGGT AAAAGGTTTG AATGCTTCAG GAATTTTGCC TACCAAGAAT
TTCAAATACG GCACTTTCGA TCAGCACGAA AATCTTGAAT GGGAAAACTA TGAAAAAGAA
ATTTTTCATA AACCTAGTAC TTGCTATATG TGTTCAGTAG CTTGCAAGCG CTCTGTAAAG
AGTGATGATC CTAAATTTCC TCTTGATCCT AAGTATGGTG GTCCTGAGTA TGAAACACTG
GCTGCTTTTG GAAGCAACTT ACTTAATGGT AATATAAAAT CTATTGCCCG AGCTAATCAA
ATTTGTAATT TGTATGGTAT AGATACAATT TCTACAGGTA ACATGATTGC CTTTGCCATG
GAATGTTTCG AAAATGGAAT TTTATCTTCT TCAGATATCG GATGCGAACT TCAGTGGGGT
GATGCGGAGT CTATTTGCTG GCTAGCAGAA ACTATTGCTC GTAGAGAAGG GATCGGAGAC
ATCCTAGCTG AAGGAATGAT TAGAGCTTCT GAAAAAATTG GTAAAGGGTC TCATAACTAT
GCTTTCCATA TTAAAGGCAA CGATCTTCCT CTTCATGACG GTCGGGGAAA GACCGGGATG
GCTATGGGCT ATGCCCTGAG CTCAACTGGT GCTGACCATG TAGAATGCCC CCATGATACT
GCTTTTCAGG GGGAAGGTTT TAAGGCTTTA AGTGCTTTGG GTGTAACAGA TCCTGTCGAA
CCCCTTAGCA CAGATGAAGC CAAAGTTCGC TTTTTTCATT TAGGACAGTT GGCGTGGGGT
ATAAACAACT TGCTATCTAT CTGTAATTTT TGTTCAGTTC CTATCCATGC CATGACATTT
CATAATTTAG TTGAATCTGT AAGGGCTATA ACTGGTTGGG ATACAAGTTT ATTTGAAATT
GTAAAAGCCA GTGAGCGTTC CCTTGTGATG AGTCGTCTTT TTAATATTAG AGAAGGGCTT
GGTTCTGATG ATGATCGTGT CATTTCGCGT TGGCATGAGC CTTTTCCCGA TGGCCCTCTT
GCAGGTCAAA AGATTGATGA ACAAGAATTA CGTGATGCAA TAGAACTATA CTATAAGGTT
TGTGGTTGGG ATCAAGAAGG TCGTCCTTCT CATGCTCGGC TTGTTGATTT AGATATAGAT
TGGATTGAAG ATTACATGTG A
 
Protein sequence
MASGYTGKIL HVDLTSSETF VEEPSEKWYK TYMGGSAFAS YYLLKMLKPG VEPLSPENIL 
VFATSVICGA PISGYNRYTV ASKSPLTNCF GESEAGGYFA PELKFAGYDA IICKGKAQYP
VYLSIVDGHV EIKDARNVWG LDNYQTLEMI KEELGDKKVR VASIGPGGEN LIRFANISND
IEHFNGRTGM GCVMGSKNLK AIAVRGSQKP SFADPEAVKE INKWHRNRLK NHPPNKGLST
GGTSVLVKGL NASGILPTKN FKYGTFDQHE NLEWENYEKE IFHKPSTCYM CSVACKRSVK
SDDPKFPLDP KYGGPEYETL AAFGSNLLNG NIKSIARANQ ICNLYGIDTI STGNMIAFAM
ECFENGILSS SDIGCELQWG DAESICWLAE TIARREGIGD ILAEGMIRAS EKIGKGSHNY
AFHIKGNDLP LHDGRGKTGM AMGYALSSTG ADHVECPHDT AFQGEGFKAL SALGVTDPVE
PLSTDEAKVR FFHLGQLAWG INNLLSICNF CSVPIHAMTF HNLVESVRAI TGWDTSLFEI
VKASERSLVM SRLFNIREGL GSDDDRVISR WHEPFPDGPL AGQKIDEQEL RDAIELYYKV
CGWDQEGRPS HARLVDLDID WIEDYM