Gene Dret_2312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2312 
Symbol 
ID8420172 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2628520 
End bp2629569 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content61% 
IMG OID645038915 
Productiron-sulfur binding protein 
Protein accessionYP_003199174 
Protein GI258406432 
COG category[C] Energy production and conversion 
COG ID[COG1139] Uncharacterized conserved protein containing a ferredoxin-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGCGA CCAAATTCAT AGCCGCTCAG GATCTCCCGC GTTGGCTGAC CGAATTGCAA 
CAGACGCGAC AGGTCTATGT ACCGGTTCAG GACAAACAGA GCGTGGTCTT CGCCCCCTTT
TCGGAGCAGG CCGAGCTCGT GCTGGACCGC CAGCCGACAA CCCCTCCTAA AGAGGTCGTT
TTCCCGCAGA CCGAGGAGCT GGTGCATTAC AAATACACCA AACGCGAGGA CGATCCGGGC
CGCAACGACA TCGAGATCGA ATCCCGCCCC GAGGCTCCGG CCGCAGTGGT AGTCGGCTGC
CGGCCTTGCG GTGCCCGCGG CTTTGCCACG TACGACCGGG TCTACACCTC GGACGCCGTG
TGTGACCCGT TTTACAAGTC TCGTCGGGAG CAGACCGCGT TTGTCAGTAT TGCCTGCAAA
CGTCCTGAGA ACTCCTGCTT TTGTCATTGG ACGGGAGGCG GCCCTGCAGA CACCACTGGT
TCAGACGTCC TGCTCACGGA AGTTGAGGGC GGCTACGTCG CCGAAGCGTG CACCGACACC
GGAGAGGCCC TGCTCTCCTC CACCCTCTTT GGCGAGGCCG GAGGCAAAGA AGCGGCGGCA
AAGACCCAAC ACGAAGAAGC CCTTGCGGCC ATGGGCACTG CCCCCGATCT TTCCGACGTC
CCGGCCAAGC TCCTCAAGCT CTTTGAAGAC ATGGACTTCT GGGAAGCTAT GTCCGCGAAA
TGTATCGCCT GCGGGGCGTG TACCTATCTG TGCCCGACCT GCTACTGCTT CAATATCACC
GATGAAGGCA GCGGGTATGA AGGGCGCCGA GTGCGGACCT GGGATACCTG CATGTCCTTT
TTGTTCACCC TGGAAGCCAG CATGCACAAC CCCCGACCGA CCAAGGCCCA CCGCTTGCGC
AACCGGGTGG GGCACAAATT CTGCTATTAC CCGGATCTGC ATGAGGGGGC GATCGCCTGC
TGTGGATGTG GGCGCTGCAT CAAACACTGC CCGGTCGCGG TCGATATCCG GGAAATAGTC
CTGCGCGCCA AGGAGGAGGC CAATGGTTAA
 
Protein sequence
MGATKFIAAQ DLPRWLTELQ QTRQVYVPVQ DKQSVVFAPF SEQAELVLDR QPTTPPKEVV 
FPQTEELVHY KYTKREDDPG RNDIEIESRP EAPAAVVVGC RPCGARGFAT YDRVYTSDAV
CDPFYKSRRE QTAFVSIACK RPENSCFCHW TGGGPADTTG SDVLLTEVEG GYVAEACTDT
GEALLSSTLF GEAGGKEAAA KTQHEEALAA MGTAPDLSDV PAKLLKLFED MDFWEAMSAK
CIACGACTYL CPTCYCFNIT DEGSGYEGRR VRTWDTCMSF LFTLEASMHN PRPTKAHRLR
NRVGHKFCYY PDLHEGAIAC CGCGRCIKHC PVAVDIREIV LRAKEEANG