Gene Dret_2310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2310 
Symbol 
ID8420170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2627178 
End bp2627666 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content53% 
IMG OID645038913 
ProductRubrerythrin 
Protein accessionYP_003199172 
Protein GI258406430 
COG category[S] Function unknown 
COG ID[COG1633] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGGAA TTTTTACAGC CGGCGATATC GTTGAGGCCG CGATTCAGGT CGAGACCAAA 
GGCGAGAGCT TTTACAAGCG GGTAGCCGGC AAGGCGGCCA ATGAGCAGGT CCGTGATCTG
TTTCTCTATC TCGGCGGAGA GGAGATCAAA CACCGGGAGA CCTTCCAGGG CCTGCTGCAG
CGGGTTGGTC AGTTTGAACT CCCAGCCTGG TCCACAGACC AGGAATATCA GGAATATCTC
GAATCCCTCG TCGAATCACA CATCCTGTTC GGCGACGGGC TTGGGGACAC CATTTTGACC
CATATGCAAA GCGAGGCCGA GGCCTTGCGC TTCGCCATGG GTTTTGAGAA GGACACCATC
TTGTTTTTTA TGGAAATGCG TGAACTCGTG CCCGAAAGTG AAAAACGGTT CGTGCAGGAG
TGCATAGAAG AAGAAAGCGA CCATCTGCGC AAGTTGCGGA CCATGCTCAA ATTATATAAG
AAGATTTAG
 
Protein sequence
MAGIFTAGDI VEAAIQVETK GESFYKRVAG KAANEQVRDL FLYLGGEEIK HRETFQGLLQ 
RVGQFELPAW STDQEYQEYL ESLVESHILF GDGLGDTILT HMQSEAEALR FAMGFEKDTI
LFFMEMRELV PESEKRFVQE CIEEESDHLR KLRTMLKLYK KI