| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2307 |
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| Symbol | |
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| ID | 8420167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2621087 |
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| End bp | 2622541 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 645038910 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_003199169 |
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| Protein GI | 258406427 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.841119 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATATTG ACGAGGAAAT TCTTTCCCGT ACGAGTTGCC TAATTGGTGA TGAGATGGTT
TTTTCCGATA GTGGGGAAAT GATCCAGGTA GACAATCCAG CAACCATGGG CATTATTGGT
CATGTACCGA ATTGCGGAAA GGAAGAGACC GACCGCGCAA TTTCGATAGC TGCGGATGTG
TTTCCCGCTT GGCGATCACG AACAGCGCTT GAGCGGGCAA ATATCATGCT AAGTTGGTAT
AATTTAATAA TGGAAAATCA GGAAGGCTTA GCGCGCCTTA TGACTCTCGA ACAAGGAAAG
CCCTTGAAGG AAGCACGAGG GGAAATAGCT TTTGGCGCTA GCTTTATACG GTGGTTTGCC
GAGGAGGCTC GCCGAGTTTA CGGTGAAATT GTGCCGCCAC CTGCGGTAAA TAAACGAATA
CATATTACCA AAGAGCCGGT AGGGGTCGTT GGAATAATAA CTCCTTGGAA TTTCCCAATG
TCTATGATTG CGCGTAAGGT GGGGCCAGCC ATGGCAGTTG GGTGTCCTTC AGTTATTAAG
CCTGCAAGTC AAACTCCATT TTCAGCCTTG GCAATGGCCC GACTTGCTCA GGAGGCAGGT
GTGCCAGCTG GTGTGATCAA TGTTATAACC GGTGATTCTC GTGCTATTGG GGGGCAACTG
ACGGGCAATC CGATAGTGAG AAAGGTGAGT TTTACTGGGT CAACGAGGGT TGGGAAGGTT
TTGTTGCAAC AATGTGCAGG AAGTGTGAAA AAGGTATCGA TGGAATTGGG GGGTAATGCG
CCATTTATTG TTTTTGGGGA TGCTGATATT GACAAGGCTA TAGAAGGGGC AATGTTAAGC
AAATATAGAA ATTCTGGGCA AACATGCGTG TGTACAAATA GATTTTATGT CCAGTCAAAT
ATATATGATC GTTTTCTGAC AAAATTTAGA CAGGCTGTTT CCTCACTTAA GGTTGGTGAT
GGATTAGAAG AAGGCGTTTC CCAGGGCCCT CTTATCGATA GTAATGCAAT TAAGCATGTA
AGTGAGCAAA TTGAAGATGG ATTAAGTAAG GGGGCACGTT TAGTTATAGG TGGGAAGCGT
CATTCATTAG GGAGGAATTA CTTTGAGCCT ACCATATTGG CAAATGTCAC ACAAGATATG
AATGTTGCGC ATGAAGAGAC TTTTGGGCCT TTAGCACCTG TTTTCGAATT TGAAACGGAA
AAAGAAGTAA TATCATTGGC TAATGATACT GAATATGGTT TGGCAGCCTA TATCTATACA
AGTGATATAA ATCGATCTTT CCGTGTTTCG GAAGCGTTGG AGTATGGATT GATAGGGGTT
AATGATGGAC ACGTATCAAC ATGCGAAGCC CCTTTTGGTG GAATAAAAGA AAGTGGGCTT
GGTCGAGAAG GGTCTCGTCA TGGAATTGAT GACTATACTG AAATAAAATA TACGAGCTTT
AATATCGATA TGTAG
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| Protein sequence | MNIDEEILSR TSCLIGDEMV FSDSGEMIQV DNPATMGIIG HVPNCGKEET DRAISIAADV
FPAWRSRTAL ERANIMLSWY NLIMENQEGL ARLMTLEQGK PLKEARGEIA FGASFIRWFA
EEARRVYGEI VPPPAVNKRI HITKEPVGVV GIITPWNFPM SMIARKVGPA MAVGCPSVIK
PASQTPFSAL AMARLAQEAG VPAGVINVIT GDSRAIGGQL TGNPIVRKVS FTGSTRVGKV
LLQQCAGSVK KVSMELGGNA PFIVFGDADI DKAIEGAMLS KYRNSGQTCV CTNRFYVQSN
IYDRFLTKFR QAVSSLKVGD GLEEGVSQGP LIDSNAIKHV SEQIEDGLSK GARLVIGGKR
HSLGRNYFEP TILANVTQDM NVAHEETFGP LAPVFEFETE KEVISLANDT EYGLAAYIYT
SDINRSFRVS EALEYGLIGV NDGHVSTCEA PFGGIKESGL GREGSRHGID DYTEIKYTSF
NIDM
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