Gene Dret_2305 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2305 
Symbol 
ID8420165 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2618453 
End bp2619622 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content59% 
IMG OID645038908 
Productdomain of unknown function DUF1745 
Protein accessionYP_003199167 
Protein GI258406425 
COG category[S] Function unknown 
COG ID[COG3287] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATGG TCAATGGCCA GGCAGAAGGA ACGGATCCGT TACAGACGGC AACGAAAGTG 
ATTGACCAAT GCAAGCAGGA GGTTGGCACC GACGCCCCTT CTCTTGCCCT CGTATTCACC
TCGATGCTTG ATGCTGATTT GGAAAGTGTC CTTTCCCGAA TCGCCCAGGC GTTCCCCGAT
ACCCCTTTGC TCGGTTGCAC AACGGATGGC GAGTTCAGCA ATGTGCGGGG CGTGAGCGAA
GACTCGCTGG TCCTTTCCCT GCTGTGTTCC AGCCGCATGG AAATCGCCGT GGGCATCGGC
GATGCTCTTT CCACGAATAC TCGTGGCGCT GTCCGCCGGG CGGCACGTCA GGCACGCCAC
AAGCTCAAGG GCGAACCGAA ACTGTGCCTG GCGCTTCCTG ACGGCCTGCA TTCCTTCACC
AACCCAGTGG CCGAGTGCCT TGGCGAAGAA TTCGGCCCCA ACGTCCCTGT GCTTGGGGGA
ACAGCCGGCG ACGATTTCCG GATCGAGCAG ACCTTCCAGT TTGTGAACGG GGAGATCTAC
ACCGATGCGG TCGGCCTCCT GCTTTTCGGA GAGGGCGTGC GTTTTGGGTA CGGCCTGGCC
AGTGGCTGGA CTCCCGTGGG ACCAACGCAC ACTGTGACGC AGTCCACTGG GTCCGGAGTC
ACCCGTGTGG ACGGACAGGA TATCTTTTCC CTGTACAAGG ATTATCTGGG CGTCCAGCAT
CTCGACATCG GTGAAATCTC CCCCTTCTCC ATCGCCCTGT ACGACGAGTC CAGCCAATCC
TACTATTTTC GTGCCCCGGC CCACGTGGAT GACCAAAACG AGATCCTCTT CTTTGCGGGC
CAGGTCCCGG AAGAGACGCA ATTCAAGATG ACCGCCTTCG GCCGCGACGC AATCGCCCAG
GCCGCCCAAC AGGCGGCGCA ACAGGCGCTG TCGAATTACC CCGGCTCCCA GCCTGACGCG
ATCCTCTCAT TTTCCTGCGC TTCACGAAAA CAGATTCTGG GCACCCGCAT TGCTGAGGAA
CAGCACCACC TGGGGGGTGT TTTCGGCCCT GAAACACCCT TCGCCGGCTT TTACACCTAC
GGTGAAATCG CGCCGTTGGT GCAAAACAGT CTTCCGTTTT TCCATAACGG TTCCGTGATT
ACGATTTGTC TGGGTGAAGA GGAGGCGTGA
 
Protein sequence
MRMVNGQAEG TDPLQTATKV IDQCKQEVGT DAPSLALVFT SMLDADLESV LSRIAQAFPD 
TPLLGCTTDG EFSNVRGVSE DSLVLSLLCS SRMEIAVGIG DALSTNTRGA VRRAARQARH
KLKGEPKLCL ALPDGLHSFT NPVAECLGEE FGPNVPVLGG TAGDDFRIEQ TFQFVNGEIY
TDAVGLLLFG EGVRFGYGLA SGWTPVGPTH TVTQSTGSGV TRVDGQDIFS LYKDYLGVQH
LDIGEISPFS IALYDESSQS YYFRAPAHVD DQNEILFFAG QVPEETQFKM TAFGRDAIAQ
AAQQAAQQAL SNYPGSQPDA ILSFSCASRK QILGTRIAEE QHHLGGVFGP ETPFAGFYTY
GEIAPLVQNS LPFFHNGSVI TICLGEEEA