| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2291 |
|---|
| Symbol | |
|---|
| ID | 8420149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2603385 |
|---|
| End bp | 2604575 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645038892 |
|---|
| Product | YibE/F family protein |
|---|
| Protein accession | YP_003199153 |
|---|
| Protein GI | 258406411 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5438] Predicted multitransmembrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCG TGACCCACTA TCTGCGGCCC GAGAGCCGCG CGGATTGGAT CTGCTGCCTG
GGGTTCGTGC TGCTCAGTGC TGTCTTGTAT TTGTTGCCCA CCGGATTCGA AGATCAGGTC
GACAGTCGAG GAGTGCGCTG CCGCGGGGAA GTGCTTTCAG TGGACAACAG CGAAGTGATC
AAGACCGGAA TGGTCAGTCA GGGGACGCAG GAACTGGAAT TGGAACTGCT CGATGGGGCC
AAGAAAGGCC ATATTGTCGA GGCCAGCAAC CATTTGATGG GGCAGATGGA CCGCGACGAG
ATCTTCGCCC CCGGCGACGT CGCCCTGGTT GTGCTGACTC TCTCTCCAGA CGGGTCCATC
CAGTATGTCA ATGCACAGGC CCAGTACCGT ATCGGTGGAG AAATGGTCTT GCTGGGAGGA
TTTGCGGTGC TGCTGCTCCT CTTTGCCGGC TGGACCGGGG CCAAAGCCTT GTTGTCCTTT
GCTTTTGCTG CCCTGGGAAT CTGGAAGATT CTGGTCCCGG CGATGCTCAA AGGGGCTGAT
CCGGTGCTGG TCTCCCTGGC CGTGGTCGTC GGCTTGGCGG CGGCGATCAT TTTTCTCGTG
GCGGGGGTGA ATCGGCGGGG ATTGACGGCG TTTACCGGCT GTATTCTGGG GGTGGGCATC
AGTTGCCTGC TTGGGCTCTA TTTTGTCGAG AGCCTGCACA TCCACGGCGC AGTGCTGCCC
TTTTCCGAGA CGCTGCTGTA TTCCGGGTTC GCCCACCTGG ATCTGGAGCG GGTCTTTATC
GGGGCCGTGT TTCTGGCAGC CTCGGGAGCG GTCATGGACC TGGCTGTAGA TGTGGCGGCG
AGCATGGAGG AGGTGGCGGC CAAGAAGCCG GACATTTCCC GGACCGAACT CATCCGCTCC
GGGCTGCACG TGGGGCGGGC GGTGGTCGGC ACCATGACCA CGACACTCTT GCTGGCCTAC
TCCGGGGGGT ATGTGACCCT GTTTATGGCC TTCATGGCCC AGGGCATTCC CATGGTCAAT
TTTTTCAATC TGGTCTATGT GGCCGCCGAA GTGCTCAAGA CATTGGTCGG CAGCCTGGGG
CTGGTGGCCG TGGGACCGCT GACCGCGGTC GCCGGAGGGT TTATTCTGGC CCGCGGCGGG
TCGCCCGCCA GAACTGCAGC GCCAGCCAAT CCAGGACAAG CGCCGGGTTG A
|
|---|
| Protein sequence | MDFVTHYLRP ESRADWICCL GFVLLSAVLY LLPTGFEDQV DSRGVRCRGE VLSVDNSEVI
KTGMVSQGTQ ELELELLDGA KKGHIVEASN HLMGQMDRDE IFAPGDVALV VLTLSPDGSI
QYVNAQAQYR IGGEMVLLGG FAVLLLLFAG WTGAKALLSF AFAALGIWKI LVPAMLKGAD
PVLVSLAVVV GLAAAIIFLV AGVNRRGLTA FTGCILGVGI SCLLGLYFVE SLHIHGAVLP
FSETLLYSGF AHLDLERVFI GAVFLAASGA VMDLAVDVAA SMEEVAAKKP DISRTELIRS
GLHVGRAVVG TMTTTLLLAY SGGYVTLFMA FMAQGIPMVN FFNLVYVAAE VLKTLVGSLG
LVAVGPLTAV AGGFILARGG SPARTAAPAN PGQAPG
|
|---|
| |