Gene Dret_2290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2290 
Symbol 
ID8420148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2602595 
End bp2603455 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content65% 
IMG OID645038891 
ProductDNA polymerase III, delta prime subunit, putative 
Protein accessionYP_003199152 
Protein GI258406410 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGA CCTTCCTCCC AGCAAGCGAC CATCAGCCCC GCCTCAAAGG GTATCTGGAC 
CGGCTCGGCA CAGCGGTTCC CGCCTCGCTA TTGCTTGAGG GAGGACGCGA ACCCGAACGC
AGGGCCCTGG CCCTGTACTG GGCGGCCCGC CTCAACTGCC TCCAGGCTGA AGCGCCCTGT
CGACACTGCC CGACCTGCCA GCAGATCGCC GAAGAAATCT TCCGCGACCT GATCGTGCTC
GACGGGCGCC AGGAAAGCAT CCGCATCGAT CCGGTTCGCA CCATGCGCCG TGAGTTGGCC
AGCCGGCCAG AATACGGGGG CACTCGGGTC ATTCTCATCC ACGAGGCCCA GTCGCTGACC
CAGGAGGCAG CCAATGCCCT CTTGAAATCC CTGGAGGAGC CCCCACCTGG CAACGCCTTC
GTTCTCACCG CTCCCCAGCG GCAATGGATC CTGCCCACGC TGGTGTCACG GAGTTGGGTC
CTGACCCTGA ACTGGCACGC GGATACGGCT GAAGAGGCTC CGGAGCTCGA GCAATGGGTC
GAGCGGCTCT TGGCCTTCTG GGTCCGTTCC CAAGGACTTT TTGAGCATAC CGGCCGCAAA
GGCAGCCTGG ACCGACTGAC CGTCGAAGCT GTCATCGCGC GCTGCCAGCG GGAACTACTG
GCAGCCATGA CCCAGTCCGC TCAACCGGAA GCAAAGATGG CTTCCCTGTT TCGCGAGCGC
ATCGCTCCGG CGACCTTTCC CGTTTTGGAC CAGACCCTGC ACAAGGCCCA GGAGGCCCTG
CAGCACAACG TCAACCCGGC GCTTGTCCTG GATTGGCTGG CGCTGCAGTT CTGGCGGGCG
ACCCGCCGCG GGCCAGAATA A
 
Protein sequence
MAQTFLPASD HQPRLKGYLD RLGTAVPASL LLEGGREPER RALALYWAAR LNCLQAEAPC 
RHCPTCQQIA EEIFRDLIVL DGRQESIRID PVRTMRRELA SRPEYGGTRV ILIHEAQSLT
QEAANALLKS LEEPPPGNAF VLTAPQRQWI LPTLVSRSWV LTLNWHADTA EEAPELEQWV
ERLLAFWVRS QGLFEHTGRK GSLDRLTVEA VIARCQRELL AAMTQSAQPE AKMASLFRER
IAPATFPVLD QTLHKAQEAL QHNVNPALVL DWLALQFWRA TRRGPE