| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2273 |
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| Symbol | |
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| ID | 8420131 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2583912 |
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| End bp | 2585111 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038874 |
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| Product | glycine betaine/L-proline ABC transporter, ATPase subunit |
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| Protein accession | YP_003199135 |
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| Protein GI | 258406393 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | [TIGR01186] glycine betaine/L-proline transport ATP binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGAGA CAAAGATTAA AGTTGAAAAT GTGTACAAGA TTTTCGGGCC CCATCCCGAA
CGAGGCATTG AGCCGCTCCA ACAGGGCAAA GGCAAAGAAG AGGTCATGGA GGAGTACAAG
CTCAGTGTTG GGGTCAACAA TGTTTCCTTT GAGGTCAAGG AAGGCGAGAT CCTCGTCATC
ATGGGCCTTT CCGGAAGTGG AAAATCGACC CTGGTCCGGT GTATCAACCG TTTGATTGAG
CCCACGGCCG GTAAGATTTA CGTCGGCGGG GACGAAATCA CCCAGCTCGA CGAGGACGGC
CTGCGCAAAA TGCGTTTAAA GCACTTCGGG ATGGTCTTTC AGAACTTCGC CCTCTTCCCC
CATCGCACCG TCCTGCAAAA CGTGGGCTAC GGTCTGGAAA TCCAGGGCGT GGAGATGGAA
GAACGCAAGC GCCGGAGCCA GGAAGCCCTG GAGCAGGTCG GCCTGAAGGG TTGGGGCGAT
TCCTATCCGT CCCAGCTCAG TGGCGGGATG CAGCAACGTG TCGGTCTGGC CCGCGCCCTG
GCCCTGGACT CGGATATCAT GCTTATGGAC GAAGCTTTTT CCGCTTTGGA CCCGCTGATC
CGCCGGGACA TGCAGGATGA GCTGATTGAG CTGCAGAGCC GGATGCAGAA GACCATTGTC
TTTATCAGTC ACGATCTGGA CGAAGCCCTT AAACTCGGTG ACCGGATCAT CCTCATGAAA
GACGGCTACG TGGTTCAGGA AGGCACGGCC GAGGAAATTC TGACCAAACC GGCGGATGAG
TATGTGGCCA AGTTTGTTGA AGACGTCGAC ATGTCCAAGG TCCTCACCGC TGAAACGGTC
ATGAAGCACT CCGAAGCCCT GGCCAATTGG CGCACCGACG GCCCGCGGGC CGCGCTGCGG
AAAATGCGCA AGGCCGGCAT TTCCTCAATC TTTGTTGTGG AAGACAGCAA CCATATCGTC
GGCGTGGTCA TGGCTGAAGA GGCCGCCAAG GCGGTTGAAA ACGGTGATAA GACGCTGGAA
AATATCCTCA TCCGCGATGT TAAAACGGTG GCCACGGACG TGCCCGCCCA TGAGCTGTTC
GCTGAACTCA GCGAAATCCC CTATCCGTTG GCCGTTGTTG ATGAAGAGAA GCGTCTGCGC
GGCGTGATTG TCCGGGGAAC GATTCTGGCG GCCCTTTCAG ACCGCGGTGT GGTGGAGTAA
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| Protein sequence | MAETKIKVEN VYKIFGPHPE RGIEPLQQGK GKEEVMEEYK LSVGVNNVSF EVKEGEILVI
MGLSGSGKST LVRCINRLIE PTAGKIYVGG DEITQLDEDG LRKMRLKHFG MVFQNFALFP
HRTVLQNVGY GLEIQGVEME ERKRRSQEAL EQVGLKGWGD SYPSQLSGGM QQRVGLARAL
ALDSDIMLMD EAFSALDPLI RRDMQDELIE LQSRMQKTIV FISHDLDEAL KLGDRIILMK
DGYVVQEGTA EEILTKPADE YVAKFVEDVD MSKVLTAETV MKHSEALANW RTDGPRAALR
KMRKAGISSI FVVEDSNHIV GVVMAEEAAK AVENGDKTLE NILIRDVKTV ATDVPAHELF
AELSEIPYPL AVVDEEKRLR GVIVRGTILA ALSDRGVVE
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