| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2254 |
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| Symbol | |
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| ID | 8420112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2560950 |
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| End bp | 2562644 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645038855 |
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| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
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| Protein accession | YP_003199116 |
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| Protein GI | 258406374 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0446] Uncharacterized NAD(FAD)-dependent dehydrogenases
[COG0607] Rhodanese-related sulfurtransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCAC AACGCATACT TGTCGTCGGC GGATCCGCGG CCGGCCCCAA AGCGGCGGCC
CGGGCCAAAC GGCTGGATCA GGACGCCCAT GTGATCATGA TCCAGAAGGC CCCGGAACTC
TCCATGGCCT CCTGCGGCTA CCCGTACTAT GTCGGCGGGT TCTTTGACCG CAGAGAGGAA
CTGTTGTGCA CCCCGACCGG CGTCGTCAGG GACGAGAATT TTTTTGCCGG AGCCAAGGGA
ATAGAAGCCA GGACCGAAAC CGAAGTCGTG GCCATTGACC GGGAGGCCAA GCAGGTTTCC
TGCAAGGATT TGCGCAGCGG GGAAACCTAT GCCCTGGACT ACGACAAACT CATTCTGGCC
ACCGGGGCCA CGCCACGCAT GCCGCCTATC CCCGGCACGG ATCTCGACGG GATTACCACC
CTGCACGCCA TGCGCGATGC GGATTATCTC CGGAGCTTGC GCGATGAGGG CGGGGTGAGA
AAAGCGGTGG TCATCGGTGG CGGCCTGATC GGTATTGAGA CCTGTGAGGC CCTGCAACTC
GCTGGCATGG AGGTCACCGT CGTTGAACTT TTGCCGCAGA TCCTGATGTT CTTGGACTGG
GAACTGGCCA AGCTCCTGGA AAACCATGTC AAGGAAAAGG CGGCCAATGT CATTACTGAC
AACGCGGTCA GCGGCTTTCT GGGCCAAAAC GGCAAGCTCA GCGGCATAAA ATTGCAAAGT
GGCACGGAAC TGGAGTGCGA ATTGGCCGTG GTGGCCATCG GGGTCCAGCC CAACGTCCAA
CTGGCCCGGG AAGCGGGACT GGACATCGGA GTCACTGGCG GCATCGCCGT GGACGAGCAG
ATGCGGACCT CCGACCCGGC CATCTTTGCC GCTGGGGACT GTATCGAGGT CCCGGACCGG
TTGACCGGAA AGAAAACCCT GGCCCCGTAT GGGGATCTGG CCAATCTCGA GGGCCGGGTC
GCTGGGGAAA ACGCGGTCCT GGAGAGTGGT GCGACGTTTC CAGGGACGCA ACATACTGGA
ATATGCAAGG TTTTTGATTA TGCCGCCGGC TCGACCGGAC TCTCGGAACG CAAAGCCCGC
GAGGCCGGAT TCAACGTCCT GACCGGTGTG AACGCCAGCC TGGACAAACC CGGCTTCATG
GGCGGGAAGC TCCTCGTCTC CAAGATGGTG GTCGATGCCG ATTCACAGCG CATGCTGGGG
TATCAATGTG TCGGACCCGG CGACGTCAGC CGGCAGATTT CCGAGGCCGC CATGGCCATA
GCCGGCAAGC AGACCATCCC TGATCTGGTC AATGCCGATC TGCCGTACGC GCCTCCGTTT
TCCTTGGCTA TCGACCATCT GATCGCTGCC GCCCATATCG TGGAGAACAA ACTCAAAGGA
CGGATGGTCG GTATCGCGAA TACTGAGGTC AAAGCCAAGC TGGACAGCGG GGAGCACCCC
TTCTTTCTGG ATGTCCGGGG ACCGGCCGAG TTTGAAGCCA TGCGTCTGGG GCTCGGGGAA
ACACTCATCC CGCTGGGCAA ATTGCGCGAC CGGCTCGGGG AATTGCCCCA GGACAAGGAC
AAAGAGATCA TCTGCTATTG CAAGATCTCC ATGCGGGGCT ATGAAGCGCA ACGCATCCTT
TGGGCCCACG GCTGGACCGA TATCAAAGTC ATGGAGGGCG GCATCATGGC CTGGCCCTAT
GGCCGGGAAA AATAA
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| Protein sequence | MASQRILVVG GSAAGPKAAA RAKRLDQDAH VIMIQKAPEL SMASCGYPYY VGGFFDRREE
LLCTPTGVVR DENFFAGAKG IEARTETEVV AIDREAKQVS CKDLRSGETY ALDYDKLILA
TGATPRMPPI PGTDLDGITT LHAMRDADYL RSLRDEGGVR KAVVIGGGLI GIETCEALQL
AGMEVTVVEL LPQILMFLDW ELAKLLENHV KEKAANVITD NAVSGFLGQN GKLSGIKLQS
GTELECELAV VAIGVQPNVQ LAREAGLDIG VTGGIAVDEQ MRTSDPAIFA AGDCIEVPDR
LTGKKTLAPY GDLANLEGRV AGENAVLESG ATFPGTQHTG ICKVFDYAAG STGLSERKAR
EAGFNVLTGV NASLDKPGFM GGKLLVSKMV VDADSQRMLG YQCVGPGDVS RQISEAAMAI
AGKQTIPDLV NADLPYAPPF SLAIDHLIAA AHIVENKLKG RMVGIANTEV KAKLDSGEHP
FFLDVRGPAE FEAMRLGLGE TLIPLGKLRD RLGELPQDKD KEIICYCKIS MRGYEAQRIL
WAHGWTDIKV MEGGIMAWPY GREK
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