Gene Dret_2253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2253 
Symbol 
ID8420111 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2560068 
End bp2560838 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content64% 
IMG OID645038854 
Productacyl-ACP thioesterase 
Protein accessionYP_003199115 
Protein GI258406373 
COG category[I] Lipid transport and metabolism 
COG ID[COG3884] Acyl-ACP thioesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAACG AGAGCAATGG TGTTTTTGCC GCCAGTTTCG TGTTGCCCCA GGCAGAGGCG 
GACAACTCCG GCCGGATTGG CGTCCCCGCC CTGGCCGCGC TCTGCCAGGA GGCAGCTGGA
CGGCACGCCG CTGCAATGGG CCTGGGAATC GCGGATGTCC TTGAGAACAA TCAGGCCTGG
TTTCTGCTGC GGATGTATCT GGAACTGGAA CGCCAGCCTC AAGCGGGGCA GACACTGGCC
ATCAGAACTT GGCCGTGCCG GATGAAAGCC GGAACGACCA AACGGGATTT TTGTCTTGCC
GATTCCACCG GTACCCCCTT GGGACGGGCG ACTTCTTTGT GGGCGATTGT CGACCTGCAG
ACCAGGCACA TGCTTGCGGC GGGGCCTTGG CTGGCTGAGC AGGTGCGGCA GTGTCCCGAG
TCGGTCCTGG CCTTTCCGGG GCGCCCCCGG GGCGGCCCGG AGCATGACTG TACAAACCGG
TGCACAGTCC TGGCCCGCCG GGCGGACCTG GATGTCCACG GCCATGTCAA CAATATCCGG
ATCCTGGAGT GGGGACTCGA GGCCGTTCCG GGTGCGGTCC GGGACCAGCG CCTGGCCTCG
GCCGTGGATA TCGTGTTCAA GCAGGAATGC CGCGATGGGG ATCGTATTCA GGTTGCTGCG
GGGGAACCTT CGCCGGGATA TTGGCACCAC ACGCTTGAGC GGGAGCAGGA CGGAAGCACG
GTGGCCGTGA TGCAGACTTG GTGGCGGACG AAAGACAACT TTGCATCCTG A
 
Protein sequence
MLNESNGVFA ASFVLPQAEA DNSGRIGVPA LAALCQEAAG RHAAAMGLGI ADVLENNQAW 
FLLRMYLELE RQPQAGQTLA IRTWPCRMKA GTTKRDFCLA DSTGTPLGRA TSLWAIVDLQ
TRHMLAAGPW LAEQVRQCPE SVLAFPGRPR GGPEHDCTNR CTVLARRADL DVHGHVNNIR
ILEWGLEAVP GAVRDQRLAS AVDIVFKQEC RDGDRIQVAA GEPSPGYWHH TLEREQDGST
VAVMQTWWRT KDNFAS