Gene Dret_2237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2237 
Symbol 
ID8420095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2540302 
End bp2540718 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content56% 
IMG OID645038838 
Producthistidine triad (HIT) protein 
Protein accessionYP_003199099 
Protein GI258406357 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATT GTCTTTTTTG TAAAATAGTC CGGGGAGAGA TCCCCAGTGC CCAGGTCTTC 
TCCTCGGAAC ATGTCCTGGC CTTTTTGGAC ATTGGTCCGA TCCATAAAGG GCATACCCTG
GTCATTCCCA AAACGCACTA CGCCACATTG TGGGAGCTGC CCGCTGCCCT GGGCCAAGAA
ATGCAGGAGG CGCTGCAAAA AGTGGGACAG GCTGTGGTTC AGGCGACGGC GGCTGACGGA
CTGAATGTGG TCATGAACAA TTTCAGGGCG GCCGGCCAGT TGGTCGACCA TGCCCATTGG
CATCTGGTGC CCCGGTTTAC TGAGGATGGT CTGCGCTGGT GGCCCCAGCA AGAGTATGAG
AGTTCTGAAA GTATGGAGGC CGTGGCTCAG GCGATACGAG AGACACTGCA ACCGTGA
 
Protein sequence
MQDCLFCKIV RGEIPSAQVF SSEHVLAFLD IGPIHKGHTL VIPKTHYATL WELPAALGQE 
MQEALQKVGQ AVVQATAADG LNVVMNNFRA AGQLVDHAHW HLVPRFTEDG LRWWPQQEYE
SSESMEAVAQ AIRETLQP