Gene Dret_2229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2229 
Symbol 
ID8420086 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand- 
Start bp2530869 
End bp2531909 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content62% 
IMG OID645038829 
ProductUDP-3-O-(3-hydroxymyristoyl) glucosamine N- acyltransferase 
Protein accessionYP_003199091 
Protein GI258406349 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.108467 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACTCT CTGAACTCGC GTCCACCCTG GGGCTTGCCT ATCAGGGACC GGACAAGGAG 
ATCCGGGGGG TGGCGACCCT TGAAGAGGCT GGGCCCGAGG ACATCTCGTT TTTGGCCAAT 
CCGAAGTACG CGGGGATGCT GCAATCCACC CGCGCCGGAG CGGTCATCCT GGCCGAGCGG 
TTTGGCGAAC AGACCACCAC AGCCCTGGTC AGTGAGAATC CGTATCTGGA TTTCGCCCGA 
GCGGTGCAGT TGTTTGCCAA ACCGCAGGGC AGTTTCAACG GCCATTCCCA ACAGGCCTGG 
ATCCATCCCG AAGCTGAGGT CGCCGACGAC GCGGTTGTCT ATCCTTTTGT CAGTGTCGGA 
GCCGGGGCAC GTGTGGGCTC GGGCACAACG CTTTTCAGCG GTGTCTATGT CGGTGAGGAT 
TGTCAACTCG GTCCGAATTG CGTGATTTAC CCCAACGTGA CCTTGATGGC CGGGACCCAA 
TTGGGCCAGG GAGTTATCCT CCACGCCGGT GTGGTCCTGG GCAGTGACGG TTTCGGCTTT 
GCCGAAGCGG CCGCGGGCCG GGAGAAATTT CCTCAGGTCG GGCGGGTTGT CGTCGGCGAC 
AATGTCGAAA TTGGGGCCAA CACCTGCGTG GACCGGGCCG CCCTTGGAGA GACCCGCATC 
GGTTCTGGCA GCAAGATCGA TAATCTGGTC CAGCTCGGTC ACAACGTTCA GGTCGGGGAG 
AACTGCATTC TGGTCTCCCA GGTCGGCATA GCCGGCAGCA CCAAACTCGG CCGCAACGTG 
ATTATTGCCG GCCAGGTGGG CGTCGCAGGA CACCTGGAGA TCGGCGAGGG CTGCCGCGTG 
GGGGCCAAGT CCGGCGTCGG CCGATCCCTG CCGCCGGGCA CGGATGTCAG CGGCATCCCG 
GCCATGGACC ACGCCACCTT TTTAAAATCT TCCGCAGTAC AAGGGCGCCT GCCGGAAATG 
GCGCGCACAG TGCGGCGGCT CGAAAAAGAA GTCGAAGCAT TGAAGGCGGC CCTGGCCTCG 
CAAGGAGAAA CCAATGTCTG A
 
Protein sequence
MKLSELASTL GLAYQGPDKE IRGVATLEEA GPEDISFLAN PKYAGMLQST RAGAVILAER 
FGEQTTTALV SENPYLDFAR AVQLFAKPQG SFNGHSQQAW IHPEAEVADD AVVYPFVSVG 
AGARVGSGTT LFSGVYVGED CQLGPNCVIY PNVTLMAGTQ LGQGVILHAG VVLGSDGFGF 
AEAAAGREKF PQVGRVVVGD NVEIGANTCV DRAALGETRI GSGSKIDNLV QLGHNVQVGE 
NCILVSQVGI AGSTKLGRNV IIAGQVGVAG HLEIGEGCRV GAKSGVGRSL PPGTDVSGIP 
AMDHATFLKS SAVQGRLPEM ARTVRRLEKE VEALKAALAS QGETNV