| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2222 |
|---|
| Symbol | |
|---|
| ID | 8420079 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 2524323 |
|---|
| End bp | 2525363 |
|---|
| Gene Length | 1041 bp |
|---|
| Protein Length | 346 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645038822 |
|---|
| Product | rod shape-determining protein MreB |
|---|
| Protein accession | YP_003199084 |
|---|
| Protein GI | 258406342 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1077] Actin-like ATPase involved in cell morphogenesis |
|---|
| TIGRFAM ID | [TIGR00904] cell shape determining protein, MreB/Mrl family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGAGGA TATTCAACAA AATATTGGGA TGTTTTTCAA ATGATCTGGC CATCGACCTA
GGAACGGCCA ACACCTTGGT TTACGTGCGG GGCAAGGGGA TTGTCTTGCA GGAACCCTCG
GTGGTGGCGG TCAAAAAGGA TAATCGGGGC ATGAACCGGG TTCTGGCCGT GGGGGAGGAA
GCCAAGCGGA TGCTGGGCCG GACCCCGGGG AATATCGTGG CCATTCGGCC GATGAAAGAT
GGAGTGATCG CGGATTTTGA GATCACCGAG GCCATGCTTC GCCATTTCAT CAAAAAAGTC
CACAACAGCC GCCGTCTGGT CCGGCCCCGG ATCGTCATCT GCGTGCCCAC AGGTATCACC
CAAGTCGAAA AGCGGGCCGT GAAGGAATCC GCGGAAAGCG CCGGCGCCCG AGAGGTCTAT
CTGATTGAGG AGCCCATGGC CGCGGCCATT GGATCCAATC TGCCGATCAC CGAGCCGACC
TCGAATATGG TCGTGGATAT CGGCGGCGGG ACCACCGAAG TGGCGGTCAT CTCCCTGTCC
GGTGTGGTCT ACAGCAAGTC AGTCCGCGTT GGCGGGGACA AGATGGACGA CGCCATCATG
CAGCACGTCA AGCGCAAGTA CAATATGCTC ATCGGGGAGA GCAGCGCCGA AATCATCAAG
AACAAGATCG GCTCGGCCTA CGACCTTGAA GAGGAGGAGG AACTGGAGAT CAAGGGCCGC
GATCTGGTCT CCGGCATCCC GCAGCACGTG ACCATCACCT CCGGAGAGGT GCGCAAGGCC
ATCGCCGAAC AGGTTGACAG CATCGTCCAG ACCGTATTGA TCGCTTTGGA GCAGACACCG
CCGGAACTGG CCGCGGATGT CGTCGACCGC GGGATCGTTC TGACCGGTGG CGGCGCCGCC
CTGCGGGGAC TGGACCAGTT GCTGCGCGAA GAGACCTCCC TGCCGATCAC CGTTGTCGAC
GCACCATTGA CAACAGTCGT CATGGGTTCG GGGAAGGTGC TGGAGAACCT CCAGGTGCTG
AAGGAGGTTA CCGTAGATTA A
|
|---|
| Protein sequence | MSRIFNKILG CFSNDLAIDL GTANTLVYVR GKGIVLQEPS VVAVKKDNRG MNRVLAVGEE
AKRMLGRTPG NIVAIRPMKD GVIADFEITE AMLRHFIKKV HNSRRLVRPR IVICVPTGIT
QVEKRAVKES AESAGAREVY LIEEPMAAAI GSNLPITEPT SNMVVDIGGG TTEVAVISLS
GVVYSKSVRV GGDKMDDAIM QHVKRKYNML IGESSAEIIK NKIGSAYDLE EEEELEIKGR
DLVSGIPQHV TITSGEVRKA IAEQVDSIVQ TVLIALEQTP PELAADVVDR GIVLTGGGAA
LRGLDQLLRE ETSLPITVVD APLTTVVMGS GKVLENLQVL KEVTVD
|
|---|
| |