Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_2214 |
Symbol | |
ID | 8420071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 2516420 |
End bp | 2517934 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645038814 |
Product | F0F1 ATP synthase subunit alpha |
Protein accession | YP_003199076 |
Protein GI | 258406334 |
COG category | [C] Energy production and conversion |
COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.188551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAATCA AAGCAGAGGA AATCAGCAAG GTCATTCAGG ACCAGATCCA GAATTATGAA GCTCGGATGG AAACCAGCGA AACCGGTACG GTCATCTATG TTGGTGACGG TATCGCCCGG GTCCACGGCG TGCAAAACGC CATGGCCATG GAATTGCTGG AGTTCCCCGG CGGCGTAAAA GGGATGGTCC TGAACCTGGA CGAAGACAAT GTCGGCGTGG CCTTGCTCGG TGAGGACTCC CACATCAAAG AAGGGGACGA GGTCAAACGT ACGGGCGAGA TTTTTTCCGT GCCGGTTGGC GAAGCGGTCA AGGGTCGCGT TATTTCACCC CTGGGTGAGC CGCTCGACGG CCTGGGGCCC ATTGACGACA CCGAGAGCCG TCCGGTGGAA ATCAAAGCTC CGGGCATTGT TCAGCGTAAA TCGGTCCATG AACCCATGTA CACTGGGCTG AAGGCCATTG ACGCCATGAC GCCCATCGGC CGTGGTCAGC GCGAATTGAT CATCGGCGAC CGTCAGGTTG GAAAGACCGC GATCTGTCTG GACTCGATTC TGGCTCAGAA AGATTCCGAC GTGCATTGCT TCTACGTGGC CATCGGGCAG AAAAAATCCA CTGTGGCTTT GGTGGCCGAC GCCCTGCGCC AGCACGGCGC CATGGAATAC ACGACCATCA TCTCGGCCAC CGCGTCTGAA GCGGCCTCGC TGCAATTTAT TGCCGCCTAC GCCGGATGCA CCATGGGCGA ACATTACCGG GACAACGGCC AGCACGCGCT TATCTGCTAC GATGACTTGT CCAAGCAGGC TGTGGCTTAT CGCCAGATGT CACTGCTGCT GCGGCGCCCC CCCGGACGTG AAGCCTTCCC CGGCGACGTC TTCTACCTCC ACTCCCGTCT GCTCGAGCGC GCGGCCAAGC TGAGTGATGA GGAAGGGGCC GGCTCCCTGA CCGCCCTGCC GATCATCGAA ACCCAGGCAG GCGACGTGTC AGCCTACATC CCGACAAACG TTATTTCCAT TACCGACGGC CAGGTCTATC TGGAACCGAA CTTGTTCAAT GCTGGGGTCC GTCCGGCGAT TAACGTCGGT CTCTCGGTCT CCCGTGTCGG CGGTGCTGCT CAGATCAAGG CCATGAAACA GGTTGCTGGT ACATTGCGCC TTGACCTGGC CCAATATCGC GAATTGGCCG CGTTCGCCCA GTTCGGTTCC GACCTGGACA AGGCGACACA GCAAAAACTC GAGCGCGGTG CGCGCATGGT CGAATTGCTC AAGCAGCCCC AATACAAGCC CATGAAGGCC GAGGAACAGG TGGCCGTGCT CTTTGCCGGC ACCCGCGGCT ATATGGATGA TGTTCCTACT GATGCCGTGC GGAAGTTCGA GGACGAATAT CTCGAGTTCA TGTACAATTC CAAGCAGGAC GTTTTGCAGG CCATCAAAGA GCAGGCAAAA TTGGACGAGG CCCTGGAAGA AAAACTCAAG GCGGCTGTGG AGGAGTTCAA AAAGGGATTC CGCGCTGAAG GCTAG
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Protein sequence | MQIKAEEISK VIQDQIQNYE ARMETSETGT VIYVGDGIAR VHGVQNAMAM ELLEFPGGVK GMVLNLDEDN VGVALLGEDS HIKEGDEVKR TGEIFSVPVG EAVKGRVISP LGEPLDGLGP IDDTESRPVE IKAPGIVQRK SVHEPMYTGL KAIDAMTPIG RGQRELIIGD RQVGKTAICL DSILAQKDSD VHCFYVAIGQ KKSTVALVAD ALRQHGAMEY TTIISATASE AASLQFIAAY AGCTMGEHYR DNGQHALICY DDLSKQAVAY RQMSLLLRRP PGREAFPGDV FYLHSRLLER AAKLSDEEGA GSLTALPIIE TQAGDVSAYI PTNVISITDG QVYLEPNLFN AGVRPAINVG LSVSRVGGAA QIKAMKQVAG TLRLDLAQYR ELAAFAQFGS DLDKATQQKL ERGARMVELL KQPQYKPMKA EEQVAVLFAG TRGYMDDVPT DAVRKFEDEY LEFMYNSKQD VLQAIKEQAK LDEALEEKLK AAVEEFKKGF RAEG
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