Gene Dret_2210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_2210 
SymbolglmU 
ID8420067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp2512015 
End bp2513424 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content58% 
IMG OID645038810 
Productbifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 
Protein accessionYP_003199072 
Protein GI258406330 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1207] N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) 
TIGRFAM ID[TIGR01173] UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGATCG AAACAAACAG TGATGGACGG ACCGGGGCCC TCATCCTTGC CGCGGGGAAG 
GGGACCCGCA TGCATTCGGA GCGGCCGAAG GTGCTGCAGA CGATTTTGGG TGAACCCATG
CTGGCCCACG TCCTGCGGGC TATTGACCCA GTGTGCCCCC AGGGCCTTGT GGTGCTGGGG
CACAAGGCGG AAGAGGTCCA GACGACTTTG GATCTTCCCG ATGCGCGAAT TGTGACCCAA
AAACAGCAGT TGGGAACCGG CCATGCTGTT CAATGCGCCT GGCCGAACAT AGAGCGCCAA
TCCTGGAAAC GGTGCGTTGT GGTTAATGGC GACGCCCCTC TTGTCCAAGT CCAGACCATC
CAAGATCTGC TGTGCAAGGT TGAGAACGCC GGAGCAGCGC TTGGTTTTTT GAGTATCGAA
CCGCAGAACC CAGCGGGATA CGGCCGGGTT GTGCGTAATG CCCAGGGACG GGTTACGGCC
ATTGTCGAAG CCAAGGATTT CTCCGAGCGC GAACACGGGC CGGATGCCGG AGAGGTCAAT
GCCGGGATTT ATGTTCTGGA TGTCGCCAGG ATTGGTCCGC TTTTGGATCG TCTGAGCAAT
GCCAACGCCC AGAACGAATA TTATCTGACC GATCTTATCG ACATGGCCAC TGCGGCGGGG
GAAACGATTG TCGCTCTTAA TGCTGGGCAG GACCCGAGTC TTTTAGGCGT CAACACGCCA
AGCGAACTTG TGGCCTGTGA GGAGTTGTTG CGCAGCCGAC TGGTCCGCCA GTGGCTGGAC
CAGGGTGTTC TCGTCAGGTC CCCAGAGCAG GTGCGCATTG GCGCATTGGT CCAATTGACG
CCCGGCGCGG AAATATGTGG TCCGTGCACC TTGACCGGAA AGACTTCCGT GGCTGAGGGG
GCTGTCGTCT CCGAATATTG CTGGCTCCAT GATGCTACTG TCGGAGCTGG AGCACGTGTG
TACCCTTTTT CCCATCTGGA GCGAGCCGAT GTGGGGGATC TGTGCGCCGT CGGCCCCTAT
GCCCGGCTCC GGCCAGGGAC CTGCTTGCAC CGTGGGGCAA AGATCGGTAA TTTTGTTGAA
ACCAAAAAGG CTGTCCTCGG GCCGGACAGC AAAGCCAATC ATCTGAGTTA TCTTGGAGAT
TGTGAACTGG GCAGCGGAGT CAACATCGGT GCCGGCACGA TTACCTGTAA TTATGACGGC
GCCAACAAGC ACCGGACCGA TATCGGAGAT GGTGTCTTTA TCGGGAGCAA TTCCGCCTTG
GTGGCTCCGG TGCACATTGG GGACAACGCC CTGGTCGGGG CGGGGTCGAC CATCACCAAG
GACGTTCCGG CGAAGACCTT GGCCGTGGCG CGGGTCCGCC AAAAGAATTT GGCACTCAAA
CAAAAGGCCA AAGACCATGA CCATGGATAA
 
Protein sequence
MVIETNSDGR TGALILAAGK GTRMHSERPK VLQTILGEPM LAHVLRAIDP VCPQGLVVLG 
HKAEEVQTTL DLPDARIVTQ KQQLGTGHAV QCAWPNIERQ SWKRCVVVNG DAPLVQVQTI
QDLLCKVENA GAALGFLSIE PQNPAGYGRV VRNAQGRVTA IVEAKDFSER EHGPDAGEVN
AGIYVLDVAR IGPLLDRLSN ANAQNEYYLT DLIDMATAAG ETIVALNAGQ DPSLLGVNTP
SELVACEELL RSRLVRQWLD QGVLVRSPEQ VRIGALVQLT PGAEICGPCT LTGKTSVAEG
AVVSEYCWLH DATVGAGARV YPFSHLERAD VGDLCAVGPY ARLRPGTCLH RGAKIGNFVE
TKKAVLGPDS KANHLSYLGD CELGSGVNIG AGTITCNYDG ANKHRTDIGD GVFIGSNSAL
VAPVHIGDNA LVGAGSTITK DVPAKTLAVA RVRQKNLALK QKAKDHDHG