| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_2207 |
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| Symbol | |
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| ID | 8420063 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 2509595 |
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| End bp | 2511151 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645038806 |
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| Product | phosphodiesterase |
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| Protein accession | YP_003199069 |
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| Protein GI | 258406327 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1418] Predicted HD superfamily hydrolase |
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| TIGRFAM ID | [TIGR00277] uncharacterized domain HDIG
[TIGR03319] conserved hypothetical protein YmdA/YtgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGT ATATTGCTGT GGCCCTGATC GGGGCCCTGG TCGGCACGGC GGCGGGAGTG
GTTTTGAACA AAAAAATCGC CGCCAAAAAA CTGCAAGATG CCAACGTGTT GGCCGAGCGG
ATTCTCGACG AGTCCCGCAA GGAGGCGCAG GCCGAAAAGA AGGAGTACCT GCTTCAAGCC
CAGGACGATA TTTATCGTCA GAAAAAGGAA ATGGAGCAGG AGCTCAAAGA GCGTGAATCG
ACTCTGAAAA AGCAGGAACT GCGCCTGCAG GAAAAAGAGG AACGCCTGCA ATCCAAACAG
GAAAGCAACA ACCAGAAAGA AAGCGAAATT GTTGTCTGGG AAAAGCGGCT GACCAAACAG
GAACGTGATC TGGAAGAGCG TCAACAGCAG CTCGATGAGA TTATCCAGCA GCAGGAAAAA
AAGCTGGAGC AGATTGCGGG ACTGACCGCC GAGGAAGCGA AAAAACGCTT GCTGGCCGAT
ATTGAGAGCA AGACCCGGCA CGAGGCGGCT GCCACCATTC GTCAGATCGA GATGGAAGCC
AAGGAGAATG CGGACCGCAA GGCGCGTGAA ATCCTGGCCA CGGCGATCCA GCGCTATGCC
GGGGACTATG TTTCTGAACA CACGGTCACG GCGGTGGAAC TGCCCAGCGA AGATATGAAA
GGCCGGATCA TTGGCCGTGA AGGGCGCAAT ATTCGGGCAA TTGAAGCGGC CACCGGCGTG
GATCTGATCA TCGACGATAC CCCGGAAACC GTGGTCCTGT CCGCGTTCAG CCCCTTGCGC
CGCGAGATCG CCAAGCGAGC CCTGGAACGA TTGATCAGCG ATGGCCGGAT TCATCCGGCG
CGCATTGAAG ACATGGTCAA GAAGGTGGAG CAGGAGATGG AGGTCAAGCT CCGCGAAATC
GGGGAGCAGG CCACATTTGA CGTGGGGGTC CACGGAATCC ATCCGGAACT GGTCCGTTTG
CTTGGCCATT TGCATTACCG CACGAGCTTT TCGCAGAATG TCCTGCACCA CTCTCTGGAT
GTGGCCTTCT TGTGCGGGAT CATGGCCGCC GAACTCGGCC TGGATGTGAA AAAGGCCAAA
CGCGCTGGAT TGTTGCACGA CCTCGGCAAG GCCGTCGATC ATGAGGTCGA AGGACCCCAC
GCGGTCATCG GAGCGGATCT GGCCAAAAAG TACAACGAAT CTGAAGAAAT CGTCCACGCC
ATCTCCGCCC ACCACGAAGA CGTCCCCCCG AAATCCGTAC TAGATGTGCT GGTCCAGGCT
GCGGACAGCC TTTCCGGCGC CCGCCCCGGT GCGCGCAAGG AATTGCTCCA GAATTATGTC
AAACGCCTCG AGGAACTCGA GGGCGTGGCC TCCGGGTTCG ACGGGGTCAG CAAGGCCTAC
GCTATTCAGG CCGGCCGGGA GTTACGGGTG GTGGTCGATT GCGAACGCCT CGGCGACGAC
AGCACCTATC TGCTCTGCAA GGACATCGCC AAGCAGGTGG AGGAGAAATT GACGTATCCT
GGACAGATCA AGGTGACCTG TATCCGGGAG CGCCGGGCTG TGGAAATTGC CAAATAA
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| Protein sequence | MIQYIAVALI GALVGTAAGV VLNKKIAAKK LQDANVLAER ILDESRKEAQ AEKKEYLLQA
QDDIYRQKKE MEQELKERES TLKKQELRLQ EKEERLQSKQ ESNNQKESEI VVWEKRLTKQ
ERDLEERQQQ LDEIIQQQEK KLEQIAGLTA EEAKKRLLAD IESKTRHEAA ATIRQIEMEA
KENADRKARE ILATAIQRYA GDYVSEHTVT AVELPSEDMK GRIIGREGRN IRAIEAATGV
DLIIDDTPET VVLSAFSPLR REIAKRALER LISDGRIHPA RIEDMVKKVE QEMEVKLREI
GEQATFDVGV HGIHPELVRL LGHLHYRTSF SQNVLHHSLD VAFLCGIMAA ELGLDVKKAK
RAGLLHDLGK AVDHEVEGPH AVIGADLAKK YNESEEIVHA ISAHHEDVPP KSVLDVLVQA
ADSLSGARPG ARKELLQNYV KRLEELEGVA SGFDGVSKAY AIQAGRELRV VVDCERLGDD
STYLLCKDIA KQVEEKLTYP GQIKVTCIRE RRAVEIAK
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